KEGG   Salvia hispanica (chia): 125203289
Entry
125203289         CDS       T09851                                 
Name
(RefSeq) U6 snRNA phosphodiesterase 1
  KO
K23093  U6 snRNA phosphodiesterase [EC:3.1.4.-]
Organism
shis  Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:shis00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:shis03041]
    125203289
Spliceosome [BR:shis03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    125203289
SSDB
Motif
Pfam: HVSL 2_5_RNA_ligase2 zf-TRAF DUF3080
Other DBs
NCBI-GeneID: 125203289
NCBI-ProteinID: XP_047957558
LinkDB
Position
2:32024178..32026720
AA seq 277 aa
MDALRASYGDTSSDSDSESCPTRIPDRTPLPPPPLSLLQPPNSAGISDVLHTDHPNRVRS
FPHVEGNYALHVYIPVYFPVSSRREILPFLERVAAAVNELHVVDVDIPLSNLIKDEQKLN
QVVLGREFHVSLGRTVPIRVHQRDSLVAMLRQKLQSHKRYWIDFDKWEVFVNDDCTRTFL
SLEVTGAGLAEIQKQIELVNGVYKLHNLPEFYQNPRPHISIAWAVGDISSSLKSVIKAEM
KRHFEVVSKKRIFTCKFGGISCKIGNKIYDICKVPEI
NT seq 834 nt   +upstreamnt  +downstreamnt
atggacgccttgagagcatcgtatggtgatacttcatctgactccgattcagaatcatgt
ccaacccgtatccccgaccgcacccctctccctccaccgccgttgtctcttctccagccc
ccaaattcagcaggtatatccgatgttttgcatacagaccatccaaatcgagtccgcagc
ttcccccatgttgagggtaattatgctttgcatgtttatattccagtgtattttcccgtt
tcatcaagaagggagattctacccttcctggaaagggttgcagctgctgtgaatgagctt
catgtggttgatgttgacatccccttaagtaatttaattaaagatgagcaaaagctcaat
caagttgttcttgggagggaattccatgtgagtttgggaaggactgttccaattcgagtg
caccagcgagactcgctagtagctatgcttcggcagaaactacagtctcataagaggtat
tggattgattttgacaaatgggaagtttttgtcaatgatgattgtactcggacctttctc
tcattggaagtcaccggagcaggcttagctgagatccagaagcaaattgagttggtgaat
ggagtctacaagcttcacaatctcccagagttttatcagaatccacgcccgcatatatcc
atagcttgggccgttggtgatataagcagctctctgaagagtgtgatcaaagcagaaatg
aagagacattttgaagttgtatctaagaaacgaattttcacttgcaaatttggtgggatt
tcatgcaaaataggtaacaaaatctatgatatatgcaaggtcccagaaatatga

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