Salvia hispanica (chia): 125203464
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Entry
125203464 CDS
T09851
Name
(RefSeq) probable beta-1,4-xylosyltransferase IRX10L
KO
K20870
putative beta-1,4-xylosyltransferase IRX10 [EC:2.4.2.-]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
shis01003
]
125203464
Glycosyltransferases [BR:
shis01003
]
Polysaccharide
Structural polysaccharide
125203464
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Gene cluster
GFIT
Motif
Pfam:
Exostosin_GT47
RXYLT1_C
Motif
Other DBs
NCBI-GeneID:
125203464
NCBI-ProteinID:
XP_047957766
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Position
2:complement(2887477..2891680)
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AA seq
417 aa
AA seq
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MRDRGRRWIFAFLVWFLTFWRIEAFKFHRAQKTERISGSAGDVLEDDPVGRLKVFVYELP
SKYNKKILQKDPRCLTHMFAAEIFMHRFLLSSPVRTLNPDEADWFYTPVYTTCDLTPNGL
PLPFKSPRMMRSAIQLISSNWPYWNATEGANHFFIVPHDFGACFHYLEEKAIERGILPLL
QRATLVQTFGQRNHVCLKHGSIIIPPYAPPQKMQAHLISPSTPRSIFVYFRGLFYDVGND
PEGGYYARGARASVWENFKDNPLFDISTEHPTTYYQDMQRAIFCLCPLGWAPWSPRLVEA
VVFGCIPVIIADNIVLPFADAIPWEEIGVFVAEKDVPRLDTILSSIPIKEILRKQRLLAN
PSMKQAMLFPQPAQARDAFHQILNGLARKLPHDKSIYVSGERILNWTAGPVGDLKPW
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgagggaccggggccggagatggatatttgctttccttgtctggtttttaactttttgg
aggattgaagctttcaagtttcacagagcccagaaaactgagagaatctccgggagtgcg
ggtgatgtcctggaagatgatcctgttggaaggttaaaagtgtttgtttatgagcttcct
agcaaatacaacaaaaagattttacagaaggacccaagatgcctcacccatatgtttgca
gcagagattttcatgcaccgtttcctcttatcgagtcctgttcgcactcttaatcctgat
gaagcagactggttctacactcctgtgtatacaacttgtgacctgacaccaaatggcctc
ccactaccattcaaatcacctcgaatgatgagaagtgctatacaactaatctcttccaac
tggccttattggaatgcaactgaaggggccaatcacttctttattgtgcctcatgatttt
ggggcgtgctttcactatctagaagagaaagctattgagagaggaattcttccgttgctc
caacgggctacattggtccagacttttggacaacgtaaccatgtttgcttgaagcatgga
tcaatcatcatccctccatatgcccctccacagaaaatgcaggcacatctaatttctcct
agcacccctcgatccatctttgtttacttccgaggtttgttttatgatgttggaaacgac
ccagaaggtggttactatgcaagaggtgcgagagcatcagtgtgggagaacttcaaggac
aatccgctgtttgacatctccacggaacacccaactacatactatcaagacatgcagaga
gctatcttctgtctctgtccgctcggatgggccccgtggagtcctagactggttgaagca
gtcgtatttggctgcattcccgttatcatagctgataacattgtgttgccttttgctgat
gcaattccatgggaagagatcggtgtttttgtcgcggaaaaggatgtccctaggctagac
acaatactaagctcgattccgatcaaagagattctaaggaagcaaagactactagccaat
ccatctatgaaacaggcgatgttgtttccacagcccgctcaggcacgggacgccttccat
cagatattgaacgggctagctcgtaagttgcctcatgacaagagtatttacgtaagtggt
gaaagaattttaaattggactgctggacctgttggtgaccttaaaccttggtag
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