Salvia hispanica (chia): 125203518
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Entry
125203518 CDS
T09851
Name
(RefSeq) ATP-dependent DNA helicase Q-like 5 isoform X1
KO
K10730
ATP-dependent DNA helicase Q4 [EC:
5.6.2.4
]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shis03032
]
125203518
03400 DNA repair and recombination proteins [BR:
shis03400
]
125203518
Enzymes [BR:
shis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
125203518
DNA replication proteins [BR:
shis03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
125203518
DNA repair and recombination proteins [BR:
shis03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
125203518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF7337
KH_PARP14_8
Motif
Other DBs
NCBI-GeneID:
125203518
NCBI-ProteinID:
XP_047957837
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All DBs
Position
2:15280941..15288413
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AA seq
941 aa
AA seq
DB search
MDSDSDSGASHISATPPNSPPPPTRSASRRAALLSSSKSRTKTSISTSTTARTFLQPVIS
RKKSNPRPQAVPEPHPEPDPPRSSPPITPLLSNLPFQIKKGNLQNGKGASDGLLHGGHCA
SKFASFLKARDKNLNFEADNAIEMKSRTSVESATPVEAVKKEVIGEDSMVKRTRKNLGVI
GGSTSDTVIDKKVKCGSEGNFVKLNINGYGRKKFKFKNKRTGFSSSSNKYRKNFRRSKGS
EKGGGGEENCVFDEEGLVVDVGMGQKTLNVDAGSIEEAVMRVRDEASDENLLKLLKLTHG
YDSFRDGQLEAIKMVLSGKSTMLVLPTGAGKSLCYQLPALVLPGITLVVSPLVALMIDQL
KHLPPVIRGGLLCSSQTMEEASETLRLLQEGSIKVLFVSPERFLNVDFISIFYGSSVLST
VVVDEAHCVSEWSHNFRPSYMRLRASLLRGKLSAGCILAMTATATNKTLCDVMHALEIPP
TNLIQSTKLRENLHLSVSKSGNRMKDLMALLKSSPFSNIKSTIVYCKFQSETDMISKYLF
DNNISARSYHSGIPAKDRSRVQDLFCSNKIKVVVATVAFGMGLDKSDVGAVIHYSLPESL
EEYVQEIGRAGRDGRLSYCHLLFDDATYIKLRSLMYSDGVDEYTVNKLLCQIFTSDRPSG
EETCSIVKESACRKFDMKEEVILTILTQLELGEVRYVKLLPQINVTCVLNFHQTPPPVLA
ARDVAVAAILKKSEMKDGQYVFNIPSVANNIRMQASELLNHLQNLKMKREITYELKDQAF
CYKILGVPNDICSLAAQLTKWLGEVETCKVRKLDMVYNASVFAAKACDKALGCNNDEHTP
CLQRKIQEYFSGDCDADTHIQMDQNSRFLRADTKVFLQSNAQAKFTPRAIARIFHGLGSP
AFPSAIWSRTHFWGRYANVEFRAIMEAAKEELVNFVGKNVT
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggattccgattcagactccggtgcctctcacatctccgccacaccgcctaattcacct
ccgccccctacgcggtcagcgtcacgccgcgctgctcttctctcctcttccaagtcaaga
accaaaacctctatctccacctcaaccactgcaagaacatttcttcagcccgtaatctcc
aggaaaaaatcaaacccacgtccacaggcggtcccagaaccacatccggaaccggatcct
ccacgatccagcccgccaatcactcctctcctctccaatctgccattccaaattaagaaa
ggcaacctacaaaatggcaagggtgcctccgatggtctccttcatggtggccactgtgct
tccaagtttgcgtctttcttgaaagctcgggataagaatctcaactttgaggccgataat
gcaattgagatgaaaagtaggacttcggttgaaagtgctactcccgtagaggcagtaaaa
aaggaggtcattggggaggattcgatggtgaaaagaacgcggaaaaatcttggtgtgatt
ggaggtagtacttctgatactgttatagacaaaaaggttaaatgtggcagtgaagggaat
tttgtgaagcttaatatcaacggctatggcaggaaaaagttcaagtttaagaataagagg
actggttttagttcttcttccaataagtatcggaaaaattttagacgaagcaagggaagt
gagaaaggtggaggaggagaagaaaattgtgtttttgatgaagagggattggtggtggat
gttggaatggggcagaaaacgttgaatgttgatgctggatcaattgaagaggctgtgatg
agggtgagagatgaggcatcggatgagaatctgctgaagctgttgaagctgacacatggt
tatgactcatttagggatggccagttagaggctataaagatggtactttctgggaagtcc
actatgctggtcttgccgactggcgcaggcaagtccttgtgttaccagttaccagcattg
gtgttgccagggatcacacttgtggtcagccctttagtagctttgatgattgatcagctt
aagcatctgcctccagtgattcgaggtggcctcttgtgcagcagtcagacaatggaagag
gcttcagaaactctccgtttgctgcaagaaggttctattaaggtcctttttgtttcgcca
gagaggtttttaaatgtggattttatttccatcttttatggctcttcggtgttatctact
gtagttgttgatgaggcccattgtgtttcagagtggtcacacaattttcgaccttcatat
atgaggcttagagcctctttgctgcgtggcaagcttagtgctggatgcattcttgcaatg
actgcaacagcaacaaataaaaccttgtgtgatgtgatgcatgctttagagattccccct
acaaaccttatccagtcaaccaagttgagggaaaatctgcatctgtcagtttctaaaagt
gggaataggatgaaagatttgatggcgctgcttaaatcttctcctttttcaaatattaaa
agcaccattgtttactgcaaattccagtctgaaactgacatgataagcaagtatcttttt
gataacaatatctcagcaaggagttaccatagtggtattcctgcaaaagataggagtcgt
gtgcaggatttgttctgttcaaacaagattaaagtggttgttgcaactgtagcattcgga
atgggacttgataaaagtgatgttggagctgtgattcattatagtttaccagaaagcttg
gaagagtatgttcaggaaattggtcgtgctgggcgtgatggtagattatcttattgtcac
cttctctttgatgatgccacatatatcaaacttcgtagtttaatgtacagtgatggtgta
gatgaatatactgtcaacaagttactctgtcaaattttcacaagtgacagaccttctggg
gaagaaacgtgttcgatagtcaaagaatcagcatgtcgtaaatttgacatgaaagaagag
gtaattttaaccattctgacgcagttggagttgggtgaagtacgttatgtgaaattgctt
ccgcaaataaatgtaacttgtgtcttaaatttccaccagactccaccaccagtacttgca
gctagagatgttgcagttgctgcaattttaaaaaagtctgagatgaaagatgggcagtat
gtgtttaacattccttctgttgcaaataacattagaatgcaagcttctgagctgttaaat
cacttgcagaatctaaagatgaagagggaaataacatatgaattgaaggatcaagcattt
tgttataaaattttgggggtaccaaacgatatttgctctttggcagctcagctaactaag
tggcttggggaggttgaaacttgtaaggtacggaagctagacatggtatataatgcttca
gtctttgccgcaaaagcttgtgacaaagctctcggttgcaacaacgacgaacatacacct
tgtttgcaaaggaagattcaggagtacttcagtggggactgtgatgctgatacacatatt
cagatggatcaaaacagtagatttttgcgagcagatacaaaggtttttctccaaagcaac
gcacaggcaaaattcacacccagagcgattgcaaggatttttcatggacttggcagtcca
gcctttccttctgctatttggtcaagaactcatttctggggacgatatgcaaatgtggag
ttcagggccataatggaggcagcgaaggaagaactcgtgaattttgtggggaagaatgta
acataa
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