Salvia hispanica (chia): 125203627
Help
Entry
125203627 CDS
T09851
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125203627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shis04121
]
125203627
Enzymes [BR:
shis01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125203627
Ubiquitin system [BR:
shis04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
125203627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
FAIM1
DUF7567
Motif
Other DBs
NCBI-GeneID:
125203627
NCBI-ProteinID:
XP_047957971
LinkDB
All DBs
Position
2:16817869..16820268
Genome browser
AA seq
321 aa
AA seq
DB search
MAALEIDSVECVSSIDGNEDEEIVSHTKQHALPHQYSSKPHGTVAVGLVPTSVHELLECP
VCTNSMYPPIHQCHNGHTLCSTCKSRVHNRCPTCRQELGDIRCLALEKVAESLELPCKFF
SLGCAEIFPYYSKLKHEAVCNFRPYSCPYAGSECSVTGDIPCLVAHLRDDHKVDMHTGST
FNHRYVKSNPREVENATWMLTVFNCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETEARN
YSYSLEVGANGRKLIWEGTPRSIRCSHRKVRDSHDGLIIQRNMALFFSGGDKKELKLRVT
GRIWKEQQNPDAGVCIPNLSI
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggctgcattggaaattgatagcgtggagtgtgtttcttcaatagatggaaatgaagac
gaagagatagtttctcacaccaagcaacatgctcttccccatcagtattcctccaagccc
catggcacggttgctgttggactggtgcccactagcgtccatgagttgctcgagtgccct
gtttgtactaattctatgtacccacccatccatcagtgtcacaacgggcacacactctgt
tcaacttgcaagtcaagggtgcataatcgctgccctacttgcaggcaagagctcggtgat
atcaggtgtttagcactagagaaagtcgcggagtcactagagcttccctgcaagttcttc
tcactgggatgtgctgaaatattcccgtattacagcaaactcaagcacgaagcagtttgc
aacttcagaccatatagttgtccatatgctggatcagagtgctcggtcacaggagacatt
ccttgcctggttgcacatttgagagacgaccacaaagtggacatgcacacagggtctacc
ttcaatcaccgctatgttaagtcaaacccacgtgaagtagaaaacgcaacatggatgtta
acggtattcaattgttttgggcaatatttctgcctccactttgaagcgttccagctcgga
atggcgcccgtgtatatggcatttctacgtttcatgggcgatgaaactgaagcgcgcaac
tacagctatagtttagaggtcggagcaaatgggaggaaactgatatgggaggggacgcca
cgcagcattcgctgtagccaccgcaaggtgagggatagtcacgacggtctgatcatccaa
cggaacatggcgctgtttttctcaggaggagacaagaaggagcttaagcttagagttacg
ggaagaatctggaaggaacagcagaacccggacgcaggagtctgcataccaaatctttct
atctaa
DBGET
integrated database retrieval system
