Salvia hispanica (chia): 125203680
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Entry
125203680 CDS
T09851
Name
(RefSeq) ABC transporter E family member 2-like isoform X1
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shis03009
]
125203680
Ribosome biogenesis [BR:
shis03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
125203680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
AAA_23
AAA_15
AAA_22
AAA_29
RsgA_GTPase
Rad17
AAA_24
nSTAND3
NACHT
TsaE
DUF5906
AAA_5
NPHP3_N
PRK
Motif
Other DBs
NCBI-GeneID:
125203680
NCBI-ProteinID:
XP_047958036
LinkDB
All DBs
Position
2:12960997..12963950
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AA seq
549 aa
AA seq
DB search
MADQEHKRIASVKDTSFHYGPNSFRLLRLPVPRPGEVLGIVGRNGIGKTTAIELLSGSLK
PNLGRFHDPPEWKEIFNFFIESELHGLHCYFYRLIKHKMKTTIKSQNGLCIPEFRQGKLV
PKAVHWNVGQCLTEVDERDMKQQLAADLELIQVMNSNVESLSGGEFQRLAIAMAAVKNAD
VYLFDEPSSYLDVKQRLKAAHVIRSLLLPNIYVIVVEHDLTVLDYLSDCICCFYGKPGSH
GAATLPFSVKEGINIFLDGYVPTEKFRFRGESLTLKVADTPQESAEEIETYATHRYPTMT
KSYENFRLKVVEGEFTDSQIIVMLGENGTGKSTFLQMLGRLLMPDPVEGSNFEIHSLEIS
YKPQKMGSKSEATVKSMLHKLIQSACKDPQFVSNVMKPLLIQKLVNKKLVDLSGGELQRV
LLTLCLGKPADLYLIDEPSAFLDSELRIVASKVIKNFIRRTKKTAFVAEHDFIMATYLAD
RLIVYQGVPSINCVANPPQPLVTGMNIFLSNLDITGRRDPTNFRPRINKPESTLHLEQKS
TGCYYYMDD
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcaggaacataagcgtatcgcctccgtcaaggatacatcctttcattatggc
cctaactcctttagattgcttagattacctgtaccgagacctggcgaagttctgggaatc
gtgggaagaaatggaattgggaaaactactgctattgaacttttgtctgggtcgctgaaa
cctaacttgggtcgctttcatgatcctcctgaatggaaagaaatttttaatttctttata
gaatctgagctgcacgggctgcactgttacttctaccgtcttattaaacataaaatgaag
acaaccatcaagtcccagaatggcttatgtatccctgaatttcgtcaaggcaaacttgtc
cctaaagctgttcattggaacgttgggcaatgccttactgaggtagatgagagagatatg
aaacaacaacttgctgctgaccttgagttaattcaggttatgaatagtaatgtggaatcg
ttatcgggtggagagtttcagaggcttgcaattgctatggctgctgtaaaaaatgcagat
gtctatttgtttgatgagccatcaagttatcttgatgttaaacaaagattaaaagctgcc
catgttatcagatccttgcttctacctaatatctatgtaattgtggtagaacatgatctt
actgtgcttgattatttgtcggactgcatatgctgcttttatgggaaacctggtagccac
ggggcagctacccttccattctctgtcaaagaaggaattaatattttcctggatggatat
gtgccaaccgaaaaatttaggtttagaggtgaatctttgacacttaaggttgctgacact
ccacaggaaagtgctgaggaaattgaaacatatgcaacacacaggtatccaaccatgact
aagagttatgaaaatttcaggctcaaggttgtggagggtgaattcactgattcacaaata
attgtgatgcttggagaaaatgggactggaaagtcgaccttcctacagatgctgggtcgc
cttttgatgcctgatccagtagaaggatctaattttgaaattcatagcctcgagatctct
tacaagccacagaaaatgggttccaaaagtgaagctaccgtgaaaagcatgttgcataaa
cttattcaaagtgcatgcaaggatcctcagtttgtatccaatgtgatgaagcctctattg
attcaaaaattggtgaataaaaagctagtggatctttctggtggagaactacagagggtt
cttctcactctttgtcttggaaagccagctgatttatacttgatagatgaaccaagtgca
tttcttgactcagagctgcgtattgttgcttcaaaagtaataaaaaatttcatacgccga
acaaagaagactgcatttgttgcggagcatgatttcatcatggcaacataccttgctgat
aggttaattgtgtatcagggggtgccttccattaattgtgttgccaatccacctcaacca
ctagtgactggaatgaacatcttcttatctaacctggatatcacaggtagaagggacccc
acaaatttccgacctagaatcaacaaacctgagtcgactctccatttggagcagaagtcc
actggatgttactattatatggatgactaa
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