Salvia hispanica (chia): 125203691
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Entry
125203691 CDS
T09851
Name
(RefSeq) E3 ubiquitin-protein ligase ATL6-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shis04121
]
125203691
Enzymes [BR:
shis01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125203691
Ubiquitin system [BR:
shis04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
125203691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-RING_16
zf-C3HC4_3
Arc
zf-Nse
Prok-RING_1
zinc_ribbon_16
Baculo_RING
Rtf2
RINGv
zf-RING-like
zf-RING_6
zf-RING_4
PHD_NSD
Prok-RING_4
PHD
Motif
Other DBs
NCBI-GeneID:
125203691
NCBI-ProteinID:
XP_047958055
LinkDB
All DBs
Position
2:9621173..9622560
Genome browser
AA seq
373 aa
AA seq
DB search
MKEQLFGKCHGIFFFIFLFLSQGAAQSVPTPENNPTMYARFTPSMAVIISILVAALFFVG
FFAIYIRHCFDSSSSGGASVRRGGLSLLRARRAAAARGLEASVIETFPTFSYSEVKDHQI
GKGALECAVCLNEFEDHETLRLLPKCDHVFHPDCIDAWLASHTTCPVCRADLVPQTGSEP
VQPPDDAVVISEPRDNDQQIVIQVDEEERNPSFEVPNRRPKMVGLGKFRSHSTGHSLVQP
GENLERFTLRLPEGVRKEVMDRAKLNRSRSLAVGLEREGSSRKGYRAGGEEESSRAGRFN
RRLELPGRGANADRWAFFTRGISFRSPRVVADSGEGSTSKRSGSKTPVKMPSFKCLEPKT
DGDDNRPFSEPPV
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagcagctcttcggcaaatgccatggcatcttcttcttcatcttcctcttcctc
tcacagggggcagcccaatcggtccccaccccggaaaacaaccccaccatgtacgcccgc
ttcaccccttccatggctgtcatcatttccatcctcgtcgccgcgctcttcttcgtgggc
ttcttcgccatctacatccgccactgcttcgactcctcctcctccggtggggccagcgtc
aggcgcggcggcctctccctcctccgggcacgccgagccgccgccgcccgcggcctggag
gcgtcggtgatcgagacgttcccgaccttctcctactcggaggtgaaggaccaccagatc
ggcaagggcgccctcgagtgcgccgtctgcctcaacgagttcgaggaccacgaaacgctg
cgtttgctgcccaagtgcgaccacgtcttccaccccgactgcatcgacgcctggctcgct
tcccacaccacctgcccggtctgccgcgccgatctcgtcccgcagaccggttccgaaccg
gtccaaccgcccgacgatgcagtcgtaataagtgaaccgagagacaacgaccagcagatt
gtaatccaagtggacgaagaagagcgaaacccgagcttcgaggtgccaaaccggaggccg
aaaatggtcggtttgggtaagttccggtcgcattcgaccgggcactcgctggtccaaccg
ggtgagaatctggagcggttcactctgaggttacccgagggagtgaggaaggaggtgatg
gaccgggcgaagctgaaccggtctagaagtcttgcggtcggactagaaagggaaggtagt
tcgaggaaaggataccgggccgggggagaagaggaaagcagccgggccgggaggttcaat
aggcgacttgagctacccggtcgaggagcgaatgcggaccggtgggcgtttttcacgaga
gggatatcgttccgatcgccgagggtggtggcggatagcggcgaaggatccacttcgaag
aggagcggcagcaagacgccggtgaagatgccttcattcaagtgcttggaaccaaagacc
gacggggatgacaatcgaccattttctgagccgccggtttag
DBGET
integrated database retrieval system
