Salvia hispanica (chia): 125203849
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Entry
125203849 CDS
T09851
Name
(RefSeq) paired amphipathic helix protein Sin3-like 2 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shis03036
]
125203849
Chromosome and associated proteins [BR:
shis03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
125203849
REST complex
125203849
Heterochromatin formation proteins
Other heterochromatin formation proteins
125203849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
Spectrin_SYNE1
Phage_integrase
Motif
Other DBs
NCBI-GeneID:
125203849
NCBI-ProteinID:
XP_047958296
LinkDB
All DBs
Position
2:35131449..35140548
Genome browser
AA seq
1392 aa
AA seq
DB search
MKRLRDEVYMNNPQFKRPFGSPSSRGESHGQSQAPGGSGNASVAGGSGTGGGGVGGGGGG
GVSSNGGGAGVSTSGAGVAAGSTQKLTTNDALSYLKQVKDMFQDQREKYDRFLDVMKDFK
AQRIDTAGVIGRVKELFKGHPNLILGFNTFLPKGYEITLTEEEEAPPKRTVEFEEAISFV
NKIKKRFQNDDHVYKSFLDILNMYRKEHKGITEVYQEVATLFDDHADLLDEFTRFLPDTS
STAPASHASFGRHPFNRYEERSSALPTMRQSHIDKQRQRRDRVIDPNGERDLSVERPETD
DDKTVMKLHKEKKHSDRENRDRRNRDQDDRDPDHENNGDISMQRHSEKRKSARKVEDSGG
NSTLGPYDDKDAVKSMYSHEFNFCEKVKERLRSADDYQAFLKCLHIYSTEIITRKELQSL
VADLLGKYPDLMEGFKEFLERCERIGNGFLAGVMGKKTLWNEGNSSKSARIEEKEKEPKR
EVEGGKEKDRYNLKYWGKSIQELDLSDCQRCTPSYRLLPEDYPIATASQRSELGAQVLND
HWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVSSTAKRVEELVNSMNNN
SNGSDAPTRIEDHHFTALNLRCIERLYGDHGLDVTDILRKNQSLALPVILTRLKQKQEEW
TKCRSDFNKVWAEIYSKNHYKSLDHRSFYFKQQDSKNLSTKSLVAEIKEIKEKRQKEDDV
LLSIAAGSRHAIIPDMEFKYIDSEVHEDVFRIIKYSCEEVCSTKDQLNKVLRFWKTFLEP
ILGVQSWLRDSETDDDHGATKCQILKGSTTGVVESEGSPNGNAMTTILKPPKSNCNGTSS
SSPEQANVCQTDLTNVGALPKEGVTMSSGEILTNCDIAGTSAPDANPGRSANSSKVINGP
IEEGSEGKPKTDNMFSSEGGETLRLNQSTTGEFAEGSKLASYNVDHADPCKIEKEEGELS
PTGDFEDNFGAYPDASLQTLPEKNHGNAGMQGQTASHDEICVDTAGENDVDADDEDSENI
SEAAEDVSGSESAADGCSREEHEEEDDAEHDDVDGKVESEDEAENTSEAQYHGGDGATVP
QSERFLQTCKPLSKHVASPSVGDEKKDRHVFYGNDTFYVLFRLHQTLYERILSAKVNSVS
RESKWRTTKEASSDPYGRFMRALFSLLDGSSDNAKFEDDCRSLIGNQSYVLFTLDKLIYK
LVKQLQTVATDENDLKLLQLYEYEKARKPEKYVDSVYYENVHVVLHEENIYRLEFTSNST
HLSIQLMDDGCEKSEVVAVSVDPNFATYLHNDYLSVHHGKKESSAIMLKRNMRKYSNLDE
STAFCRATENVLIMNGLECKMAATSSKISYVLDTEDFFIRLGRRRERMKERQSQKAQARV
EQFRQFLTSSVS
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atgaaacggctgagagatgaggtgtatatgaataatcctcagtttaagcggccattcggt
tcgccgtcgtctcgcggggaatcgcatgggcaatcacaagctcctggtggcagcggtaat
gcttctgtagctggtggcagcggtaccggcggtggtggagttggaggaggaggaggaggt
ggtgttagtagtaatggtggtggggctggggttagtaccagtggtgctggtgttgctgct
ggtagcacacaaaagctaactacaaatgacgccttgagttatcttaagcaagttaaggat
atgttccaagatcaaagggaaaagtatgataggttccttgacgtcatgaaagatttcaag
gctcaaagaattgatactgctggcgtcattgggagggtgaaggaattgtttaagggacac
cctaatttaatccttggatttaatacatttttgcctaagggctatgaaattaccctcact
gaagaagaggaggctccaccaaaaaggacagttgagtttgaagaggcgatcagttttgtg
aataaaattaagaaacgttttcaaaatgatgatcatgtttataaatctttcctagacatc
ttgaatatgtaccggaaggaacacaaggggataactgaggtctaccaagaggttgcaacg
ctttttgatgatcatgccgatcttctcgatgagtttaccagatttctccctgatacttca
tctactgctccggcatctcatgcttcttttggtagacatcctttcaatcggtatgaggag
agaagttctgccttgcctacaatgcgtcagtcgcacatagacaagcagcggcaacggagg
gacagggttattgaccccaatggagagagagatcttagtgttgagcgtccagaaacagat
gatgataaaacagttatgaagttgcacaaggagaagaagcatagtgacagggaaaacagg
gacaggagaaatcgtgatcaggatgatagagatcctgaccatgagaacaatggtgatata
agcatgcaacgacattctgagaaaaggaagtctgctcgaaaagtcgaagactctggtggg
aattcgacgttgggaccatatgatgataaagatgcagtaaaaagtatgtacagccatgaa
ttcaatttctgtgaaaaggtcaaagagaggttgcgcagtgcagatgactaccaggcattc
ttaaaatgtcttcacatttacagtacagaaatcattactagaaaggaattacagagcttg
gttgctgatttacttgggaaatatccagatcttatggagggattcaaggaatttttggag
cgctgtgagcggatcggtaatggttttctggctggtgtaatgggcaaaaaaacattatgg
aatgaaggaaattcctcaaaatctgcaaggatagaagaaaaggagaaagaaccaaagcgt
gaagtggagggagggaaagagaaggataggtacaacttaaaatactggggaaaatccatt
caggagctcgacctttccgattgtcagcgttgcactcccagttatcggctccttcctgaa
gactatccaatagccacagctagccagaggtcagagcttggtgctcaggttctaaatgat
cactgggtgtctgtgacatctggtagtgaggattactcatttaaacacatgcgaagaaac
cagtatgaagaaagtctatttagatgtgaagatgacaggtttgagctggatatgttattg
gagtctgtcagctcaactgccaagcgagtagaggaacttgtgaacagtatgaataataat
tcaaatggttctgatgctcctacacgaatagaggaccaccattttacagctctcaattta
agatgtattgaacgcctatacggtgaccatggtcttgatgtgacggacattttgcgtaaa
aatcaatctttggctttgcctgttatcctcacacgtctgaagcagaagcaagaggaatgg
actaaatgtcgatctgatttcaacaaagtttgggctgaaatatattctaagaaccactac
aagtcgcttgatcaccggagcttctatttcaagcaacaagattctaagaacttgagcaca
aaatccttagtggcagaaatcaaagaaatcaaggagaaacggcaaaaggaggatgatgta
ctgcttagtattgctgctggaagcaggcatgctatcattccagacatggaatttaaatac
attgattctgaagttcatgaagatgtctttaggattatcaagtactcctgtgaggaggtc
tgttcaacaaaagaccagttgaataaagtgttgaggttctggaaaacttttcttgagcca
atactcggtgttcagtcctggctgcgtgactcggaaactgatgatgatcatggtgccact
aaatgtcaaatactaaaaggaagcacaactggcgtagttgaaagtgaaggcagtcctaat
gggaatgctatgaccacgatattgaagccaccaaaatcgaactgcaatggtacctccagt
agttcacctgaacaagcaaatgtctgccaaactgatttgacaaatgtgggtgcgttaccc
aaggaaggagtaactatgtcatctggtgaaatattaacaaattgtgacattgctggtact
tcagcccctgacgctaaccctgggcgtagtgcaaattcgtcaaaagtgattaatggtcca
atcgaggaaggtagcgaagggaaacctaaaacagacaatatgttttcctcagagggcggg
gagacattgagattaaatcaatcaacgactggagagtttgcagaaggctctaaacttgct
tcatataacgttgatcatgcggatccttgtaaaattgaaaaagaagagggcgaattgtct
cctactggagattttgaagataattttggtgcatatccagatgctagcttgcaaaccttg
cctgagaaaaatcatgggaatgctgggatgcaaggtcaaacagccagtcatgatgagata
tgtgtagatactgctggtgaaaatgatgtagatgctgatgatgaagacagtgaaaatatt
tctgaggctgcagaagatgtttcaggcagtgagtctgctgctgatggatgttcaagggaa
gaacatgaggaagaggatgatgcagagcatgatgatgttgatggtaaagttgagagtgaa
gatgaggctgagaatactagtgaagctcaatatcatggtggcgatggtgcaacagtgcca
cagtctgaacgatttttgcagacctgcaagcctctgtcaaagcatgtggcttccccgtcg
gtaggtgatgaaaagaaggatcgacatgttttctatggcaatgacacattttatgtgctc
ttcaggttgcatcagacactgtatgaaagaatattatccgccaaggtaaattctgtatct
cgtgaatcaaaatggagaaccacaaaggaagctagttctgatccttatgggaggtttatg
agggctttatttagtttacttgacggatcttctgataatgccaaatttgaagacgattgt
cgatctttgattggaaaccagtcatatgtgcttttcacactggataagttgatttataag
ttggtgaagcagctccaaactgttgcaactgatgagaacgacctgaagctgcttcagctg
tatgaatatgagaaggcaaggaagcccgagaagtatgttgattcagtttattatgaaaac
gtccatgttgttctgcacgaagagaatatataccggcttgaatttacatctaattctacc
cacttatccatccaattgatggatgatggatgtgagaagtctgaagttgttgcagtttcg
gtagatcctaactttgcaacctatctgcataatgattatctttcagttcatcatggaaaa
aaggagtcatcagcaattatgctgaaaaggaatatgcgcaagtatagtaatttggatgaa
tctacagctttctgcagggcaacagaaaatgtcttgatcatgaacggcttggaatgtaag
atggccgccacctcatcaaagatctcatacgtcctcgacacagaggacttttttattcgt
ctgggaaggagaagggagagaatgaaagaacgacaatcgcagaaagcccaggcaagggta
gaacagtttcgccagtttctgacgtcttctgtgagttag
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