Salvia hispanica (chia): 125203876
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Entry
125203876 CDS
T09851
Name
(RefSeq) cyclic nucleotide-gated ion channel 4-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
shis
Salvia hispanica (chia)
Pathway
shis04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
125203876
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shis04040
]
125203876
Ion channels [BR:
shis04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
125203876
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Paralog
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Motif
Pfam:
cNMP_binding
IQ_SCN5A_C
Motif
Other DBs
NCBI-GeneID:
125203876
NCBI-ProteinID:
XP_047958338
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All DBs
Position
2:complement(40143551..40147974)
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AA seq
635 aa
AA seq
DB search
MPNCELQQSLSCNSSSDSEESEEKEAEICGGDCREWRILNPRSAWVQEWNRLFLLVCAVG
LFVDPLFFYTLSISESCMCLFVDGWFAVTVTVLRCMIDSLHLWNVWLQLKMNRRMHHDGD
ALRYFKSRRGFSFDLFVILPLPQLVIWVVIPKLLERGWTTVVMTVLLVMFVFQYLPKIYH
SVCLLRRMQNFSGYIFGTVWWGIALNMIAYFVASHAVGACWYLLGIQRAARCLKEQCMRT
KGCDIRMMACQDSIYYGAKDLISDRTRFIWGENSHARSSCLQNYDNFDYGAYKWTVQLVT
NNNRLEKALFPIFWGLMTLSTFGNLESTTDWLEVVFIIIVLTTGLLLVTMLIGNIKVFLH
ATTSKKQAMQLKMRNIEWWMRKRRLPQGYRQRVRNYERQRWAAMRGVDECEMTRKLPEGL
RRDIKYHLCLDLVRQVPLFQHMDNLVLENICDRVKALIFTKGETITREGDPVQRMLFIVR
GHLQSSQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFVERLPPSSSSLVTLETTEAFGL
EAEDVKYVTQHFRYTFVSEKVKRSARYYSPGWRTWAAVAIQLAWRRYRHRLTLTSLSFIR
PRRPLSRCSSLGEDRLRLYTALLTSPKPNHDHFDF
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgccgaattgcgagttgcagcaaagcctcagctgcaattccagcagcgattccgaagaa
tcggaggagaaagaggcggaaatctgcggcggcgattgccgtgaatggcggattttgaac
cctagatcggcgtgggtgcaggaatggaacagattgtttctcctagtgtgcgcggtgggg
ctgtttgtggatccgcttttcttctacacgctgtcgattagcgagagctgcatgtgcctc
ttcgtcgacggctggttcgccgtcaccgtcaccgtcctccgctgcatgatcgactccttg
cacctctggaacgtgtggcttcagttgaagatgaaccggagaatgcaccacgacggagac
gcattgagatatttcaagtcgaggagaggtttctccttcgatctcttcgtcatcctgccg
ttgcctcagcttgtaatctgggtagtaatcccaaagcttctagaaagagggtggacaacg
gtggtgatgacggtgttgttggtaatgttcgtcttccaatacttgcccaaaatctatcac
tcagtgtgtctgctccggcgtatgcaaaatttttccggctacatttttggcactgtttgg
tggggcattgctctcaacatgatcgcctactttgttgcatctcacgctgtaggagcatgc
tggtacttgcttggcatccaacgagctgcaagatgcttgaaggagcaatgcatgaggacc
aagggctgtgacataagaatgatggcttgccaagattcaatttactacggagctaaagat
ctcatcagtgatagaacaagattcatatggggtgagaatagccatgcaaggtcttcatgc
ctacaaaattacgacaatttcgactatggcgcttataagtggaccgttcagctcgtcacc
aataacaatcgtctcgagaaagcattgtttcccatattttggggactcatgactcttagt
acttttggaaatctagagagcacgacagactggttagaagtggtgtttataattattgtc
ctcaccactggactccttctggtcacaatgttgattggtaacatcaaggttttcctacat
gcgacgacgtctaagaagcaagcaatgcagttgaagatgaggaacatagagtggtggatg
agaaagaggcggcttccgcaagggtacaggcagagggtacgcaactacgagaggcagcgt
tgggcggcgatgcgtggggttgatgaatgtgagatgactcggaaacttccagaaggactc
aggagagatatcaaatatcatctgtgtttggatttggtgagacaggtgccattgttccag
cacatggacaatctcgtcctcgagaacatatgcgatcgggtcaaagctctcatattcaca
aagggagaaacgataacaagggaaggtgatccagtgcaaagaatgttgttcatcgtcaga
ggccatcttcagagcagccaagtgctgcgcgacggagtgaagagctgttgcatgctcggc
ccgggcaacttcagcggcgatgagttactctcatggtgcttaagaagaccttttgtggag
aggcttccgccgtcttcctcctcgcttgtaactctggaaacgacagaggcgttcgggctc
gaagcagaagatgtcaagtatgtgactcagcatttccgctacacgttcgtgagcgagaaa
gtgaagagaagcgcgcgctactactcgcctggatggcgaacgtgggcggctgtcgccatc
cagctggcgtggaggaggtatagacatcgcctcacgcttacttccctctccttcataagg
cctcggaggccattgtccaggtgctcttctctaggagaagacagacttaggctttacaca
gctttgctcacctctcctaagcctaatcatgatcattttgatttctga
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