Salvia hispanica (chia): 125203903
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Entry
125203903 CDS
T09851
Name
(RefSeq) hydroxyproline O-galactosyltransferase GALT6-like
KO
K20843
hydroxyproline O-galactosyltransferase 2/3/4/5/6 [EC:2.4.1.-]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
shis01003
]
125203903
Glycosyltransferases [BR:
shis01003
]
O-Glycan biosynthesis
O-linked Gal type
125203903
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Gene cluster
GFIT
Motif
Pfam:
Galactosyl_T
Gal-bind_lectin
Fringe
Porin_7
Motif
Other DBs
NCBI-GeneID:
125203903
NCBI-ProteinID:
XP_047958371
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Position
2:18542390..18546556
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AA seq
662 aa
AA seq
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MGMNKRAKIDSLISLSRLRSIQVFTGLLFLYLIFISFEIPMVLRAGLGLESTEAESTIPI
ISHPIMKAENDNQLSRSKKNETLVFRAQGREMGGFKNVSGMNFDENAFNSVGNDEFSELH
KVVRDAFALGMKWMEDLKSGKMQSELLNRTALNRTEEPCPSSVVLSGDDLIARGKIMVIP
CGLSLGSHITLVGTPRQAHTSKESQAGIRKDDGRSKVESQFLMELQGLRAVDGEAPPRIL
HFNPRLEGDWSGHPVIELNTCYRMQWGTSQRCQGWRSRADEETVDGQVKCEKWIRDDSGS
EESKTTWWLKRLIGRTKKVTVDWPFPFAQNKLFVLTLITGLEGYHINVDGRHILSFPYRP
GFTLEDATGLFINGDIDVHSIVAATLPTSHPSAAPREHLDMSVKWKAPSLPTQPVDLFIG
ILSAGNHFAERMAVRKSWMQYELVKSANVVTRFFLAVHGRKEVNVELMKEADYFGDIVMV
PYMDNYDLVVLKTIAICDYGVHSVAAKYIMKCDDDTFVRVDAVMREVNKQSGRSFYIGNI
NYYHNPLRHGKWAVTYEEWPEEVYPPYANGPGYILSSDIAEYVASKFKEHKLRLFKMEDV
SMGMWVENFNSSRPVEYVHSLKFCQFGCVEGYYTSHYQSPRQMACLWEKLQLHGIPRCCN
IR
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgggaatgaataagcgagctaagatagactcgctgatctcactgagtcgactccgatcg
attcaagtgttcacaggtttgctgtttttgtatttgattttcattagctttgagattccc
atggttttgagagctgggttagggttggaatccacagaggcagagtctactatacctatt
atttcacatccaataatgaaagcggaaaatgataatcagctatcacgatcaaaaaagaat
gaaacattggtttttcgggcgcaggggcgggaaatgggcgggtttaagaatgtttcgggt
atgaatttcgatgaaaatgcgttcaatagtgtgggtaacgatgagttttctgagctgcac
aaagtggttagggatgcatttgctctaggaatgaaatggatggaggatttaaagtcagga
aaaatgcagagtgagctgctaaatcggacggctctgaatagaacagaggagccgtgtcca
agttcggtggtgttgtctggggacgatttgattgcgagagggaaaataatggtgataccg
tgtggtttgtcgttgggttcccacatcacacttgttgggactccacggcaggcccacact
agtaaggagtcgcaagcggggattaggaaggatgatgggaggagcaaggtggaatcgcag
ttcctaatggagctgcaggggttgagagctgtggatggggaggcgccacctagaatactg
catttcaatcccaggttagagggggattggagtgggcatcccgtgattgagctaaatacc
tgttataggatgcaatgggggacttctcagcgctgtcaagggtggaggtcgagggctgat
gaggaaactgttgatggacaggtgaaatgtgagaaatggatccgtgatgatagtgggtct
gaagaatcaaagaccacatggtggttaaaaaggctgattgggaggacaaagaaggtcact
gttgattggccttttccttttgcacaaaacaagttgtttgtacttacacttattactggt
ttggaagggtatcacatcaatgtggacgggagacatattttatcctttccatatcgcccc
ggtttcactcttgaggatgctacggggctgtttatcaatggggatatcgacgttcattct
attgttgctgctactctgcctacttcacacccaagtgctgcacccagggagcatctggat
atgtctgtgaagtggaaagccccaagcctgcctactcaacctgtagatctctttatcggc
atcctttctgctggcaatcatttcgctgagcggatggctgtgagaaaatcttggatgcaa
tatgaattagtcaaatctgcaaatgttgtcactcgcttttttttagcagtgcatggaaga
aaggaagtgaatgtggagctcatgaaagaagcagattattttggtgatatagtcatggtt
ccttacatggacaattatgatctcgttgtactgaagactattgcaatttgtgactatggg
gttcactcagtggcagctaagtacattatgaaatgtgacgatgatacattcgtaagggta
gatgctgttatgagggaagtaaacaaacaaagtggtagaagcttctacattggaaatatc
aactactaccacaaccctctacggcatggtaaatgggccgtcacttatgaggaatggccg
gaagaggtgtatccgccctatgcaaatggccctggttatattctgtcatctgacatagca
gagtatgtcgcatccaagtttaaggagcataaactaaggttattcaagatggaagatgtt
agcatgggaatgtgggttgaaaatttcaacagctcgaggccggttgagtatgtgcacagc
ttgaagttctgtcaatttggatgtgttgagggttattatacttcacactaccaatctccc
agacagatggcctgcttatgggaaaagttgcaacttcacgggatcccccgatgctgcaac
atccgatga
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