Salvia hispanica (chia): 125203913
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Entry
125203913 CDS
T09851
Name
(RefSeq) structural maintenance of chromosomes protein 1
KO
K06636
structural maintenance of chromosome 1
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shis03036
]
125203913
Chromosome and associated proteins [BR:
shis03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
125203913
Meiosis-specific proteins
Cohesin complex and associated proteins
125203913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_29
AAA_15
CENP-F_leu_zip
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
125203913
NCBI-ProteinID:
XP_047958381
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All DBs
Position
2:13199116..13226000
Genome browser
AA seq
1226 aa
AA seq
DB search
MPSVKVTGKIIRLELENFKSYKGHQVIGPFYDFTAIIGPNGSGKSNLMDAISFVLGVRTG
QLRGAQLRDLIYAFDDREKQQKGRRAFVMLVYQRADGSEIKFTRSITPAGSSEYRINDSM
VNWDDYNAELKNLGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSEEYKRSYEEL
EVQKAEADEKAVLAHQKKKTISAEKKQKKLQKEEAERHLKLQEQLKSLKQDNYLWKLFNI
ENDIEKANEDLSVEEDSLKEIVRELETYEDELKKKSKEQAGYMKEIQLRRRKIAEKQSRL
DKQSELVKLKEETTRINSKIKSTNKELSKRREEKKRHVQEIAKLENDLRDVTRQLEDLRE
KSQDAGGKLQLVDSELETYHQIKEEAGMKTAKLKGEKEVLDRQQNADMEAQKNLEENVQQ
LENRKEELELQEKQMQTRLKKILDAVGKHKEELIRVRKEQREMKDKLGDSKHKHDMLKSK
INDVDLQLRELKADRHENDRDARMSEAVETLKRLFPGVHGRMTDLCRPTQKKYNLAVTVA
MGRFMDAVVVEDEHTGKECIKYLKEQRLPPQTFIPLLSVRVKPVIERLRTLGGTAKLAFD
VIQFDPVLEKAIIFAVGNTLVCDDLDEAKHLSWSGQRYKVVTTNGILLTKSGTMTGGTSG
GMEARSHKWDDKRIEGLKKKKEDLESELDKLGSIREMQLKESEASGKISGLEKKIQYTEI
EKKSIEDKLNKLKVEKRNIEDEIGRFRPELEKLEKVIATRTSKIQTLEKRINDIVDLIYK
KFSESVGVKNIREYEENHLKAIEQMAADRFNLHSQQSKLKYQLEYEKKRDVGSRIAKLES
TIANLENSLRDVKEKQKELESATETANAEIEVLNEQVEGLNSKAEECEKDIQGWKKKISA
ATSNISKHNRQIKSKESLIDQLSLRKQEILEKCELEHIDIPIISDPMDTGSSGPGPVIDF
STLSRSLQQKAKPSEREKIEADFAQKIAALISEIEKTAPNLKALDQYEAVLEKERAASKE
WEAARDEQNKITSDYNKVKQMRHECFMAAFNHISNNIDKIYNELTKSNTHAVGGASSTHA
VGGTAYLNLENPDEPYLYGIKYSAMPPTKRYRDMSQLSGGEKTVAALALLFAIHSFKPSP
FFILDEVDAALDNLNVAKVASFIRAKSCGGAKLESDVDFGSSFQSIVISLKDNFYDKAEA
LVGVYRDSERGCSQTLTFDLTKYRES
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgtgaaagtcaccggcaaaataatccgcctggagcttgagaacttcaaatcc
tataaaggccaccaagtcatcggtccgttctacgacttcacggctataatcgggcctaat
ggctccgggaagtcgaatctaatggacgccataagcttcgtcctgggcgtccgtacaggg
cagctccgtggggctcagctgcgggaccttatttatgcgttcgatgaccgcgagaaacag
cagaaggggcgtagggcgttcgtcatgctcgtttaccagcgtgcggatgggtcggagatc
aagttcactcggtcaatcacgcctgctggtagtagcgagtacaggattaatgacagtatg
gtgaactgggacgactacaatgcggagttgaaaaatcttggtatccttgttaaagctcgg
aatttccttgtttttcagggagatgtggaatctattgcttcgaagaaccccaaggagcta
acagccttactagaacaaatatctggctctgaagaatacaaaagatcgtatgaagaacta
gaagtgcaaaaggctgaagctgatgaaaaggctgtccttgctcatcagaagaagaaaacc
atttcagccgagaaaaagcagaagaagctgcagaaggaggaggctgaaaggcatctcaaa
ttgcaagagcaactgaaatctttgaagcaggataattacctttggaaactattcaacata
gagaatgacattgaaaaagctaatgaggacctttctgttgaagaggatagcctgaaagaa
attgtgcgtgaattggaaacttatgaagatgaattaaagaaaaagagcaaagaacaagct
ggatatatgaaagagattcaactacgccggaggaagattgctgagaaacagagtagactt
gataaacaatctgagcttgttaagttaaaggaggagacaactcgtataaactcaaagata
aaatctactaataaggaactgagtaagaggagagaagagaaaaagagacatgtgcaggag
attgcgaaacttgaaaatgacttgagagatgtgacaaggcaacttgaagatttgcgtgag
aaaagccaggatgctggtggaaagcttcagctagttgacagtgaattggagacatatcac
cagatcaaagaggaggccgggatgaaaactgctaagttaaaaggtgaaaaagaggtttta
gacaggcaacaaaatgctgatatggaagcacaaaagaacttggaagagaatgttcaacaa
ttggaaaatcgaaaagaggaactggagttgcaagagaaacaaatgcagaccaggcttaag
aaaattcttgatgctgttgggaaacacaaagaagaacttatcagagtgcgtaaagaacaa
cgtgagatgaaggataagcttggagactctaagcacaaacatgatatgctgaagtcaaag
ataaatgatgtagatcttcagctacgggagttgaaagctgacaggcatgaaaatgataga
gatgcccggatgtctgaggcagttgaaacccttaaacgcctttttcctggtgtgcatggt
cgcatgacagatctttgtaggccaacacaaaagaagtataaccttgcagttaccgttgct
atgggaagattcatggacgctgtagtggttgaggatgaacatacagggaaagaatgcatt
aagtatctgaaagaacagaggcttccaccacagacatttattcctcttctttcagtgcgt
gtgaaaccagtcatagagaggttgcgcactttgggtggaactgctaagctggcctttgat
gtgattcaattcgatcctgtgctggaaaaagctattatatttgctgttggaaatacctta
gtttgtgatgatcttgatgaagctaaacatctgagctggagtggacaaagatataaagtt
gtaactactaatgggatcttattgaccaaatcgggtacaatgactggtggcacaagtggt
ggaatggaagcacgctcacataaatgggatgacaaaagaattgaggggcttaagaagaaa
aaagaagacctggagtctgaattggataagcttgggtcaataagagagatgcagctaaag
gagtctgaagcatcaggcaagattagtggccttgaaaagaagattcagtatacagaaatt
gagaagaaaagtatcgaggacaaactgaacaaactgaaggtggaaaaacggaatattgaa
gatgagatagggcgcttcaggcctgaacttgaaaagttggaaaaagttattgccaccaga
acatcaaagatccaaacactggagaaaaggatcaatgatattgttgaccttatctacaag
aaattcagtgagtctgttggtgttaagaacatacgcgaatatgaagaaaaccatcttaag
gctattgagcagatggctgcagatagattcaacttgcatagccagcaatcgaagctaaaa
tatcaactggagtatgagaagaaacgagatgttggttcgcgtattgccaagctggaatca
acgattgccaacttagaaaattcgttgagagatgtgaaggaaaagcaaaaggaactggag
tcggcaactgaaaccgcaaatgctgagatcgaagttttaaatgaacaagtggaaggtttg
aattcaaaagcagaggagtgcgaaaaggatattcagggatggaagaaaaagatctctgct
gctacatcaaacatttcaaagcataatcgtcagattaagtctaaggagagtctgatagat
caattgagtttgcgtaaacaagagatactggagaagtgtgaactagagcacattgacatt
ccaataatctctgaccctatggatactgggtcatcagggccagggcctgttattgatttc
agtacactgagtagatcgcttcagcaaaaggcaaaaccatctgaaagggagaagatcgaa
gcagattttgcacagaaaattgctgcattgatttctgaaattgaaaaaactgctccaaat
ttgaaggcactagatcagtatgaagctgtcttagagaaggaaagagctgcatcaaaagag
tgggaagcagccagagatgagcagaataagataacttcagattacaacaaagttaagcaa
atgaggcatgaatgcttcatggctgcttttaatcacatctcaaataacattgacaagata
tacaatgaactcacgaagagcaacacccacgcggtgggtggggcaagcagcacccatgcg
gtgggtggaacagcatatctgaacttggagaaccccgatgagccatacctttatggtata
aaatacagtgctatgccaccaacaaagcgatacagggatatgtcacaactatctggtggt
gagaagacagttgcggcacttgctttgctctttgccatccacagtttcaaaccttcaccg
tttttcatattggatgaagtggatgctgcattagacaatttgaatgttgccaaggttgct
agctttattcgagcgaaatcttgtggaggagcaaaattagagtctgatgttgactttgga
tctagtttccagagcatcgtgatatctctcaaggataatttttacgataaagctgaagcc
ttggttggtgtatatcgtgattctgagcgagggtgctcacaaaccttgacattcgattta
accaaataccgtgaatcttga
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