KEGG   Salvia hispanica (chia): 125203956
Entry
125203956         CDS       T09851                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
shis  Salvia hispanica (chia)
Pathway
shis03030  DNA replication
shis03410  Base excision repair
shis03420  Nucleotide excision repair
shis03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:shis00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    125203956
   03410 Base excision repair
    125203956
   03420 Nucleotide excision repair
    125203956
   03430 Mismatch repair
    125203956
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:shis03032]
    125203956
   03036 Chromosome and associated proteins [BR:shis03036]
    125203956
   03400 DNA repair and recombination proteins [BR:shis03400]
    125203956
DNA replication proteins [BR:shis03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    125203956
  DNA Replication Termination Factors
   ELG1-RFC complex
    125203956
Chromosome and associated proteins [BR:shis03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    125203956
DNA repair and recombination proteins [BR:shis03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     125203956
  Check point factors
   HRAD17(Rad24)-RFC complex
    125203956
SSDB
Motif
Pfam: Rep_fac_C AAA Rad17 DNA_pol3_delta2 AAA_lid_RFC1 RCF1-5-like_lid AAA_16 AAA_11 AAA_assoc_2 AAA_22 DUF815 AAA_5 AAA_14 ATPase_2 RuvB_N AAA_7 AAA_24 AAA_3 AAA_30 AAA_2 ResIII DNAX_ATPase_lid nSTAND_NTPase5 bpMoxR AAA_19 nSTAND3 AAA_25 SLFN-g3_helicase Mg_chelatase RNA_helicase AAA_28 DUF3086 AAA_18 TIP49
Other DBs
NCBI-GeneID: 125203956
NCBI-ProteinID: XP_047958441
LinkDB
Position
2:complement(26220981..26224231)
AA seq 364 aa
MAEVIDVMDVDDDNGNFNSAKPNLKGKNVVVSAAPPDTRATPWVEKYRPQSLDDVAAHRD
IVETIDRLASGNRLPHLLLYGPPGTGKTSTVLAMARKLYGNKMQNMVLELNASDDRGIDV
VRQQIQDFASTQSISFGGKSAVKLVLLDEADAMTKDAQFALRRVIEKYTKSNRFALICNN
VNKIIPALQSRCTRFRFAPLDAVHVRDRLRHVIESEGLDVPENGMKALVQLSNGDMRKAL
NILQSTHMACQQITEEAVYLCTGNPLPKDIEQISHWLLNEPFTTSSQRISEMKTRKGLAL
VDIVREVTMFVFKIKMPPAVRIQLINDMADIEYRLSMACNDKLQLGSLIAAFTRARGSIV
AAAT
NT seq 1095 nt   +upstreamnt  +downstreamnt
atggctgaggtgatagatgtcatggatgtcgacgacgacaacggcaatttcaattccgcc
aagcccaacctcaagggcaaaaacgtcgtcgtttcagctgctccaccggacaccagagcc
accccttgggtcgagaaatatcgcccccagtctctcgacgacgtcgccgcccaccgcgac
attgttgagaccattgatagattagcatctgggaacagattgccccacctactgctttat
ggaccgccagggacagggaagacttctactgttttggcaatggctcggaaactttatgga
aacaagatgcaaaacatggttctggagctgaatgcatccgatgatcgtggtattgatgtt
gttaggcagcagattcaggactttgcaagcacacagagcatctcttttgggggaaagtct
gccgtaaaattggttctactggatgaggcagatgccatgactaaggatgcacaatttgct
cttcgtagagtgatcgagaaatacaccaaaagcaatagatttgctttgatctgcaacaat
gtcaataaaattattccagcactgcaatcaagatgtacacggttccgctttgcccccctt
gatgctgttcatgtcagggataggctcagacacgtaattgaatctgaagggcttgatgtt
ccagaaaatggtatgaaagctcttgtacagcttagcaatggtgatatgaggaaagccttg
aatattttacagtcaacacatatggcctgtcagcaaatcacagaagaagctgtctacttg
tgtactgggaaccctttgcccaaagacatcgagcagatatcccattggctcctgaatgag
cccttcacaactagcagccaaagaatatctgagatgaagacaagaaaagggttggctctg
gttgatatcgtgagagaagttaccatgtttgtttttaagatcaagatgccaccagctgtc
cgcattcaacttattaacgatatggctgatatcgaatataggttgagcatggcatgcaat
gacaagctgcagctggggtcattaattgctgcttttacacgagccagaggttcgatagtt
gctgctgcaacataa

DBGET integrated database retrieval system