Salvia hispanica (chia): 125204022
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Entry
125204022 CDS
T09851
Name
(RefSeq) glutamate receptor 2.8-like isoform X1
KO
K05387
glutamate receptor, ionotropic, plant
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shis04040
]
125204022
Ion channels [BR:
shis04040
]
Ligand-gated channels
Glutamate (ionotropic)
125204022
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Peripla_BP_6
SBP_bac_3
Lig_chan-Glu_bd
Peripla_BP_5
Motif
Other DBs
NCBI-GeneID:
125204022
NCBI-ProteinID:
XP_047958515
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Position
2:complement(39492737..39501589)
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AA seq
936 aa
AA seq
DB search
MQTPQLFWLHMLLFMCLCIDPLSGFNATAAKANVGIILDLDGTVGKICKTCISMAIEDFY
SNRDYNTMIEPHFRDSRSDVVTAASAAIDLLKNTQVMAIIGPQRSIQADFVIDIGDKVEV
PIISTATSPSVSLKNSSYFIRSAWSSSSQVKPIAAIVKKFGWREVVFVYEDSTYGSGLVP
YLTVDLLKSNAVISQQSVISSNATEDQIRQELGKLMKMRTRVFVVHMLPGLASRFFKVAK
EAGMMGKGYAWLIVDVLTSLLDSMDPQTMEAMQGVIGVKAYVPKSVELINFEKRWRKRFH
MENPEMDRTELNIFGLWSYDSITVLAEAIERAGVTSPQFNRSVDGANLTDLGAIGTSLAG
PPLLGWIRNHMARGLSGDFNISNGQLQPSAFRIVNVNGGKEISIGFWSEQCGISRELKPY
DHQDDCLTGKENLDPIVWPGKENIVPKGWELAVNGEKFRVGVTAKIGFNEFLKVEKNEET
GVVQATGFCIDVFEKVWENIPYSVPVEYVALGTEYRSNDEIMQKLDGKDLDAFVADITVT
ASRSKYIDFTFPYSESGVGIVVPIKPNERKNAWIFMKPLTTGLWLTIGAFVVYTGFVIWV
LEHRVNKAFRGPPNQQVGMIFWFSFSTLVFAQREKVRSNLTRFVVIVWVFVVLVLTSSYT
ANLTSMLTVDQLQPKINSVNDLIKNGEFVGHQIGSFVSEFLTNNGIVESANLRSYSNVDQ
FHEALSKGSRNGGVGAIIDELPYIRLLLSKHCDKYTMIGPIYPTSGFGFAFPKGSPLVFD
VSHEILRLKEDTDLMVRITEKWLGDEKDCPNANGALSKSQRLNLDSFKGLFLIAGVSSTL
ALAIFLSSFLYENRYLLESTASTKEKLLGLARIFSREKDESLSSKETTHPSEVGISVAAS
PAMSIPCDQDQGMFSQDEGFSTVEIFVKQRRQETYS
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgcagactcctcaattgttttggttgcatatgcttttgtttatgtgcctttgcattgac
cctttgagtggtttcaatgcaactgctgcaaaggctaatgtgggaatcattcttgatctc
gacggaactgtggggaagatatgcaagacttgcatctctatggcaatcgaagatttctac
tccaaccgcgattacaacaccatgatcgagcctcatttcagagactcgaggagtgatgtt
gttactgcagcttctgcagctatagatttgttaaagaatactcaagtgatggcgataatc
gggccacaaagatccattcaagcagattttgtgatagatattggtgacaaggtggaagtt
ccaataatatctacagcaacgagcccgtcagtatccctgaaaaactcatcgtacttcatc
agatcagcgtggtcttcctcttctcaggtcaaaccaattgcagcaattgtgaagaaattc
ggatggagggaggttgtttttgtgtacgaggattcaacctatggaagcggattagtgccg
tatttgactgtggatctgctaaagagcaatgctgtgatctcgcagcaaagtgttatttct
tctaatgccacggaggatcaaatccgacaggagctcggcaagctgatgaagatgaggacg
agggtgttcgtggttcatatgctgccaggccttgcatcccgtttcttcaaggtggccaaa
gaagcagggatgatgggcaaggggtatgcctggctaatagttgacgtgctaacgagtctc
ttagattctatggatccacaaactatggaggcgatgcaaggtgtaataggtgtgaaggct
tacgttccaaaatccgttgagcttattaactttgaaaagagatggagaaagaggtttcat
atggagaatccagagatggacagaacagaactcaatatttttggtctatggtcttatgac
agcatcacagttttggcagaggcaatcgaacgagctggtgtgacatccccgcagttcaat
agatcggttgatggagcaaatttgacagatttgggagcaataggaacatcgttggctgga
ccaccacttctaggttggatcagaaaccacatggccagaggactgagtggtgattttaac
ataagtaacggccaactgcagccatctgcatttaggatagttaatgtgaatggcgggaaa
gaaatctcaattggattttggagtgaacaatgtggtatctcaagggagcttaagccttat
gatcatcaagatgattgtttgaccggaaaggaaaatcttgaccccattgtatggcccggg
aaagaaaatatagtgcctaaagggtgggaacttgctgtgaatggtgaaaagtttagagtt
ggagttacagcaaaaattggtttcaatgaattccttaaagttgaaaagaatgaagaaaca
ggtgttgttcaagcaacgggtttttgcattgatgtttttgagaaggtgtgggaaaatatt
ccgtatagtgtccctgtcgaatatgttgcattgggtacagaatataggagtaatgatgaa
attatgcagaagttagacggaaaggatcttgatgcattcgtggcagacataacggtcaca
gctagcagatctaagtacatagattttacgttcccttactcagaatcgggagttggcatt
gttgttcctatcaagcctaacgagaggaagaatgcttggatttttatgaaacctctaaca
accggcctctggctaaccattggcgcgttcgttgtctacactggatttgtcatttgggtt
cttgagcatcgcgtaaataaagcatttcggggtccacctaaccagcaagttgggatgata
ttctggttctcattctcaacgcttgtttttgctcaaagggagaaagtaaggagcaacttg
acaagatttgtggtgatcgtgtgggtgttcgtggtgctggttttgacgtcaagttacact
gcaaacctgacatccatgctaacagtagatcaactgcagcctaaaatcaacagtgtgaat
gatctgataaagaatggagagtttgtcggccaccaaataggctccttcgttagtgaattc
ttgacaaacaatggcattgttgaatccgcgaacctgagaagctacagcaatgtggatcaa
ttccacgaagctctctccaaaggcagcagaaatggaggagtaggcgcgattattgatgaa
ctcccttacattaggcttctcctttccaagcactgcgacaagtataccatgatcggtcca
atctatccaacttctggctttggtttcgcatttccaaagggttcgccactggtttttgat
gtttcacacgagatcctgaggctgaaagaggatacagatttaatggtgaggatcacggag
aaatggctaggagatgaaaaggattgccccaatgctaatggagctctgagcaaatctcag
aggctcaatcttgacagttttaaggggctcttcctcattgccggagtgtcatcaacgctc
gctttggctatattcttgtcaagtttcttgtatgagaatcggtatctactagaatctact
gcttcaacgaaggaaaagcttctcgggctcgctagaattttttcgagggagaaggatgag
tcgttgtcatccaaggaaacgactcatccaagtgaagtcggaatttctgtagcagcaagt
ccagccatgagcattccatgtgatcaagatcaagggatgttttcacaagatgaaggattc
tcaacagtagaaatcttcgttaaacaacgtcgacaggagacatattcatga
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