Salvia hispanica (chia): 125204089
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Entry
125204089 CDS
T09851
Name
(RefSeq) uracil-DNA glycosylase, mitochondrial isoform X1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
125204089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shis03400
]
125204089
Enzymes [BR:
shis01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
125204089
DNA repair and recombination proteins [BR:
shis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
125204089
Prokaryotic type
125204089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
125204089
NCBI-ProteinID:
XP_047958595
LinkDB
All DBs
Position
2:complement(16086588..16091697)
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AA seq
309 aa
AA seq
DB search
MAAPAKTLIDFFQQPAAKRLKGASSPPLSPFSSLKDDGTAASSISPEQKRRMEYNKSLAL
SKRNLKLCSGKLSKAVATGVGYVKLEELLVEETWSEVLSGELQKPYARKLCEFVEAEIFH
GSTPIYPPQHLIFNALNTTPFDSVKAVIIGQDPYHGPGQAMGLSFSVPEGIKVPSSLQNI
YKELQKDMGCTIPSNGNLEKWAVQGVLLLNAVLTVRQHQANSHAKKGWEQFTDAIIGAIS
QKRSGVVFLLWGNYAQAKSRLIDESKHYILKSAHPSGLSANRGFFGCRHFSRTNQLLEKL
GVSPIDWQL
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccctgccaaaaccctaatcgacttcttccagcaaccggcggcgaaacgcctc
aagggagcctcttcccctccactcagcccattttcctcgctcaaggacgacggcaccgcc
gcttcctccatttcgccggagcagaagcgcagaatggaatacaacaaatccctcgcattg
tcgaagcggaacctaaaactatgctctggtaaactctccaaggctgttgcaacaggggtg
gggtatgtaaaactggaggagctattagtggaggagacctggtcagaagtgctatccggg
gagctgcaaaagccttatgcaagaaagttgtgtgagtttgtcgaggctgaaatattccat
ggcagcacaccaatttaccctccccagcatctgatttttaatgctcttaacaccactcca
tttgactcagtaaaggccgttattattggacaggacccataccatggaccaggccaagca
atgggcctctctttctctgtgccagaaggcatcaaagtgccttcaagtctacaaaacata
tataaagagctccagaaagatatgggatgcacaattccatctaatgggaatcttgaaaaa
tgggctgtacagggtgtcctgctattaaatgctgttctaacagttagacagcatcaggcc
aactctcatgccaaaaaagggtgggagcagtttactgatgctataattggagcaatttca
cagaaaaggagtggagttgtttttctcctctggggaaactatgcccaggcgaaatcccgg
ttgatagatgaatcaaagcactatattctcaaatcagcacatccttcaggtttatccgca
aacaggggcttttttggatgcaggcatttttctcggacaaaccagctcttggagaaattg
ggagtatctccaatagattggcagttgtag
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