Salvia hispanica (chia): 125204108
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Entry
125204108 CDS
T09851
Name
(RefSeq) DNA mismatch repair protein MLH1-like isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
shis
Salvia hispanica (chia)
Pathway
shis03430
Mismatch repair
shis03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
125204108
03460 Fanconi anemia pathway
125204108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shis03400
]
125204108
DNA repair and recombination proteins [BR:
shis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
125204108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
125204108
NCBI-ProteinID:
XP_047958622
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All DBs
Position
2:29385486..29392406
Genome browser
AA seq
726 aa
AA seq
DB search
MELEECTPSPLQREPPVIRRLDEEVVNRIAAGEVIQRPVSAVKELIENSIDAGSTSITVV
VKDGGLKLIQVSDDGHGIRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYV
GHVTVTTITKDQLHGYRATYKDGVMGCEPKACAAVKGTQIMIENLFYNMAARKKTLQNSA
DDYPKIVDLICRFAIHHTSISFSCRKHGAARADVQSASKSSRLDAIRSVYGVSVAQNLLK
IEVSDDPSSSSFKMDGFISNSNYIAKKIAMVLFINDRLVECGSLKRAIEIVYAATLPKAS
KPFIYMSIKLPPEHVDVNVHPTKREVTLLNQEIIIEKIQSAIESKLRNSNESRTFREQKV
DPLDNSVSTSKAASTPPSSFGTKPQKVPVHKMVRMDSQDPAGRLDAYLQSTQSSQLQRSS
CLASMRSSIKERRNSRETADLTSIQELIREIDSSCHTELLDLVGHCTYLGMADDVFALLQ
HNTHLYLANVVNLSKELMYQQVLRRFAHFSAIQLSVPAPLRELVMLALKEDELEPEGIEH
ENLKEKIAEMNTNVIKEKTEMLEEYFGIHIDPDGNLSRLPIVLDQYTPDMDRVPELILCL
GNDVNWDDEKDCFQTIAAAIANFYAFHPPLLPNPSGESSQFYKRSPSGDPVEGSTSHSAD
DIPEEQIEQDLFLEAERAWSQREWSIQHVLFPSMRLFLKPPTSMATDGTFVKVASLEKLY
KIFERC
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggagttggaagaatgcacgcccagtccacttcaaagggagccgccggtaatccgacgc
ttggacgaggaggtggtcaacagaatcgccgccggtgaggtcatccaacggccggtctcc
gccgttaaggagctcatcgagaacagcatcgacgccggctcaacttccatcaccgtggtg
gtgaaagacggtggcctcaaactcatccaagtctccgacgacggtcatggaattcgatat
gaagatcttccaattttatgtgaaaggcatacaacctctaaactgagtaaatatgaggac
ttacaatctatcaaatccatgggatttagaggcgaggcgttagcaagtatgacgtatgtt
ggtcatgtgacagttaccaccataactaaagatcaattacatggatacagggcaacttat
aaagatggtgtgatggggtgtgaaccaaaagcatgtgcagctgttaaaggcactcaaatt
atgatagagaatttgttttataacatggctgctaggaagaaaacacttcagaattccgct
gatgactacccaaagatagtcgatttaatttgccggtttgccatccatcacacgagcata
agcttctcttgcagaaagcatggagctgctagagcagatgttcaatcagcttctaaatcc
tcgaggcttgacgcaatcagatctgtctatggggtatcagttgcacaaaaccttttgaag
atagaagtctctgatgatccatcgagttcaagtttcaagatggatggatttatttctaat
tctaactacatcgcaaagaagatagctatggtgctattcatcaatgatagactcgtggag
tgtggttctctaaagagagcaatcgagattgtttatgctgctacattgccaaaggcatcc
aaacctttcatctacatgtcaatcaagttgccacctgaacacgttgatgtaaatgtgcac
ccaactaagagagaggtaaccctcctgaaccaagaaattataattgagaagatacaatct
gctattgagtcaaaattgaggaattccaatgagtcgaggacatttcgagaacagaaagtg
gatcctttagataattcagtttctacgagcaaggctgcctcaactcctccctcgtctttt
ggaacaaagccacaaaaagttcccgtgcacaaaatggtaaggatggattcccaggatcct
gcaggaaggttggatgcatacctgcagagcacacagtctagtcaactgcaacgaagttct
tgcttggcctccatgaggtcttcaatcaaagaaaggaggaactccagggagactgcagac
cttactagcattcaggaacttatcagagagattgactctagctgccacactgagttgctg
gaccttgttggacactgcacgtaccttgggatggcagacgatgtttttgctctgctgcag
cacaacactcatctgtatctagctaatgtggtcaacttgagcaaagagctcatgtaccag
caagttttacgtcgatttgcacattttagcgcaattcaattgagtgttcccgctcctcta
cgggaattagtaatgctggctctaaaggaggacgagttggaacctgaaggcattgaacat
gaaaacctgaaagaaaagatagcagaaatgaatactaatgtgatcaaggagaaaactgag
atgttggaggaatactttggcattcatattgacccggatggtaatttgtcccggctgccc
attgtacttgaccaatacacacctgatatggatcgtgttccagagcttattctttgtttg
ggcaatgatgttaattgggatgatgagaaggactgttttcaaacaatcgctgcagctatt
gcgaacttctatgccttccatccccctttgttgccaaatccatcaggtgagagctcacaa
ttttataaaagatctccttctggagatcctgtagaaggaagtacgtcacacagtgctgat
gacataccagaagaacaaattgagcaagatctatttttggaggctgaaagagcttggtct
cagcgcgaatggtcgattcagcatgttttgtttccctccatgaggctcttcctcaagcct
cctacatcaatggctacagatggaacttttgtcaaggtggcatcattggagaaactctac
aaaatttttgaaagatgctaa
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