KEGG   Salvia hispanica (chia): 125204159
Entry
125204159         CDS       T09851                                 
Name
(RefSeq) nuclear cap-binding protein subunit 2-like isoform X1
  KO
K12883  nuclear cap-binding protein subunit 2
Organism
shis  Salvia hispanica (chia)
Pathway
shis03013  Nucleocytoplasmic transport
shis03015  mRNA surveillance pathway
shis03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:shis00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125204159
  09122 Translation
   03013 Nucleocytoplasmic transport
    125204159
   03015 mRNA surveillance pathway
    125204159
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:shis03019]
    125204159
   03041 Spliceosome [BR:shis03041]
    125204159
Messenger RNA biogenesis [BR:shis03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     125204159
Spliceosome [BR:shis03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    125204159
SSDB
Motif
Pfam: RRM_1 DUF5721
Other DBs
NCBI-GeneID: 125204159
NCBI-ProteinID: XP_047958683
LinkDB
Position
2:29381140..29383953
AA seq 252 aa
MASLFKDPTKLSAYRDRRFSGTQEEYEEALLTSTTVYVGNMSFYTTEEQVYELFSRAGEI
KKMVMGLDKNSKTPCGFCFVMYYSREDAEDTVKYISGTILDDRPIRVDFDWGFQEGRQWG
RGRSGGQVRDEYRTDYDPGRGGYGKIVQKELEAQRQLVDYGAGSLDSFAPVMQPNYGRQG
GNYGQGGSYRGRDYPRKRHREDDRRGSDFQRRKSDFVYRRNPDNEPRPEKNPRFRESGDS
DEEDDDDRKRSS
NT seq 759 nt   +upstreamnt  +downstreamnt
atggcctcacttttcaaggatccgaccaaattgtcggcgtatagggacagaaggttttcc
gggacgcaggaagagtacgaggaggcactactgacctcgaccaccgtctacgtgggcaat
atgtcgttttacacgacggaggagcaggtttacgagctgttctctcgggcgggggagata
aagaagatggtcatgggtttggataagaacagcaagactccttgcggattctgcttcgta
atgtactactccagagaagatgctgaagatactgtgaaatatatcagcgggactattctc
gatgaccgtcctattcgtgttgactttgattgggggtttcaagaaggcaggcaatgggga
cgtgggcggagtggtgggcaggtgcgggatgaatatcgtacagactacgatccaggtaga
ggtggttatggaaaaatagtccagaaagagttggaagcccagaggcagttagtcgattat
ggtgctggatcgctagattcatttgcacctgtcatgcaaccaaactatggtaggcaaggt
ggaaactacggtcaagggggctcctaccgtggcagagattacccacgcaagcgacataga
gaagatgaccgccgtgggtcagattttcaaaggagaaagtcagacttcgtgtatcggaga
aatccagataatgaacccagacctgaaaaaaatccgcgatttcgggagagcggcgattca
gacgaggaggatgatgatgatcggaagcggtcgtcgtag

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