KEGG   Salvia hispanica (chia): 125204502
Entry
125204502         CDS       T09851                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 12
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
shis  Salvia hispanica (chia)
Pathway
shis03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:shis00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    125204502
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:shis03021]
    125204502
   03036 Chromosome and associated proteins [BR:shis03036]
    125204502
Transcription machinery [BR:shis03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     125204502
   Coactivators
    SAGA/TFTC/STAGA complex
     125204502
Chromosome and associated proteins [BR:shis03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     125204502
    STAGA complex
     125204502
    TFTC complex
     125204502
    SAGA complex
     125204502
    SLIK complex
     125204502
SSDB
Motif
Pfam: TFIID_20kDa Histone CBFD_NFYB_HMF
Other DBs
NCBI-GeneID: 125204502
NCBI-ProteinID: XP_047959135
LinkDB
Position
2:6849612..6853110
AA seq 425 aa
MFALTHLRSDFPPFDSMDQTPSTPQPTDPPPQTTTATSSVTSTAPTTTTSTSFASSNPTP
SLKPPTAAQSNNSQTRPPFNTRPWQQPPYSHFSLPSPPMPASSASTSSSISAPPPSRPGM
AIGVPAHSPSTGPPSPASFSSHTPPAYAQQPQIRQPVQGMGMTGALGASSSMRPAGVSSN
QLRPSQSSLRPQSSPTNQSPAAQNFQGHGMLRVSSLGSPGVLSPSSSQSPQTQNQPWLSS
GTQGKPPLPTPSLRPQASPQSFQPRSHITQQQHHHMPTTPQQQTIGSSQQSPQPSASGQS
QDHFNQQFPPPRSITHQQQMSRGPGIGTQRPPLGMNVSGASHPGALNKPATADTEESSNR
ILSKRSIQELVNQIDPSEKLDTEVEDILVDIAEDFVESITTFGCLLAKHRKSSTLEAKDI
LLHLG
NT seq 1278 nt   +upstreamnt  +downstreamnt
atgtttgccctcactcacctccgtagcgatttcccccctttcgattccatggatcaaacg
ccttccactccgcaacccaccgacccgccgccgcaaactacaaccgccacctcctccgtc
acatccaccgccccaaccaccaccacctccacttcattcgcatcttcaaaccccacgcca
tccctaaaacctcctaccgcggcacaatctaacaattcccaaacaaggccgccgtttaat
acccggccatggcagcagccgccctactcgcacttctctctcccctcgccgcccatgcct
gcttcttccgcctcgacatcctcttcgatttccgctccgccaccgtctcgccccggaatg
gcgatcggagtccctgctcatagcccctccacaggccccccttcgcctgcctcattctct
tcacacactcctcccgcttacgctcagcagcctcagataaggcagccggtgcaaggaatg
ggaatgacgggtgcactgggcgcctcatcgtcaatgcgtcccgcaggtgtgtcttcgaat
cagctgaggccttcacagtcatctcttagaccgcaatcgagcccaacgaaccagtctcct
gctgcacagaattttcaaggacatggcatgctcagagtttcctcacttggatctcctggg
gtactatcaccgagtagttctcaaagtccacagacccagaaccagccatggctgtcttct
ggaacccaaggaaaacctcctctaccaaccccgtctcttcggcctcaggcaagccctcaa
tcatttcaaccgagatcccacattacgcagcagcagcaccatcacatgcctaccaccccg
caacaacagacaattggttccagccagcagtctccacaaccctcagcctcaggccagtca
caggatcattttaaccaacaatttcctcctccccgatccattactcatcaacaacagatg
agcaggggaccaggaattggaacccaaaggccacctcttggcatgaacgtgtccggtgca
tcacaccctggagccctcaataaacctgccactgcagatactgaagaatcttccaacagg
attttaagtaaacgcagcattcaggagcttgtaaatcagattgatccatctgaaaaattg
gatactgaagttgaagacattctagtcgacattgctgaggattttgttgaatcaattaca
acatttggttgtttgttggcgaaacaccgaaaatcttccactttagaagcaaaagacata
ctcctgcatctgggttag

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