Salvia hispanica (chia): 125204998
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Entry
125204998 CDS
T09851
Name
(RefSeq) cell division control protein 48 homolog C-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
shis
Salvia hispanica (chia)
Pathway
shis03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125204998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shis03009
]
125204998
Ribosome biogenesis [BR:
shis03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
125204998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_16
AAA_14
AAA_22
AAA_5
RNA_helicase
nSTAND3
NPHP3_N
Rad17
ABC_tran
AAA_28
ATPase_2
AAA_18
Mg_chelatase
AAA_33
IstB_IS21
NACHT
TsaE
NB-ARC
Bac_DnaA
AAA_17
DUF815
TIP49
Sigma54_activat
AAA_23
AAA_29
PIF1
Parvo_NS1
ORC-CDC6-like
Viral_helicase1
Motif
Other DBs
NCBI-GeneID:
125204998
NCBI-ProteinID:
XP_047959736
LinkDB
All DBs
Position
1:complement(49009139..49015696)
Genome browser
AA seq
746 aa
AA seq
DB search
MASSCHRETPVSGGKLSMDGLSDRIARSLLECHDQTLRCLIEPAAAGAKNLTDAQIVHLI
CSTFPLTFSRSNRNLLIERVAKISPLSCRRASAGDEPAAKRPKFDETQNANRQIEVAKAS
APASYSDSNGWELDSARSHRYGGDGWDTDANGDNMAIIEGFVQGNKLGINMREVKKNEDK
WPMFSDIGGRYYILEDLTRDVIAPMHQLKLLHLIGGKPSTAILLHGPPGCGKTMLARAIG
NEARVPFYETSAVALKSGVSGILELFSRAYNNAPSIVFIDEIDALTSETESLWQCPAKQL
MACMKRSNSGPGGYVLTIGATNRPDALDLALRQRFDREFLLDVPKNDQRHDILSVLTSKY
KVDVDFDLKELARLTQGFVAGDLVELVNKARMISFNCAIHMRAHIKGFKDGFEAYGKPFS
DEELEQVGLDRESIHQAIETVWAVWPSAEMEEFSTTPYTNWDDVGGLQLLKLELERRIIK
LIKFPQVYESLWESGLKNFPTSFFLYGPSGCGKTLIVDALAKEAGANLMHIKGNELSKFE
WRQLMVDNIFKCAKTHPPCIVFFDEVDVLSRDDFTDEDLEEDEYIWKSWEYRAIWAQISD
LKKESHVYVIATSSRLEILERVPFIKEDFGRILYAPLPTPEERGEILKILAQNKPIDAEV
DLMALGKDSACENFSGSDLYALMTEAIKFAIDRPALSCGGSMTITNADFEAALAKVSPSL
SAEERNKWALHAKNIDVVHGASVMDW
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcctgtcaccgggaaactcctgtttccggcggaaaattgagcatggacgga
ttaagcgaccgcatcgccaggtctctccttgaatgtcatgaccaaactctgcgctgtctc
atcgagcccgccgccgccggagccaaaaacctaaccgacgcgcaaatcgtgcacctcatc
tgctccaccttccctctcacattctcccgctccaatcgcaacctcctaatcgaacgcgtc
gcgaaaatatctccgctctcgtgcaggagagcgagcgccggggacgagccagcagcgaaa
aggccaaaatttgacgagactcagaatgcgaatcggcaaattgaggtagctaaggcttct
gctccagctagttattctgattctaacggttgggaacttgattctgctaggagtcataga
tatggtggtgatgggtgggatacggatgcgaatggggataatatggctataattgagggt
ttcgtgcaaggaaataaattagggattaacatgagagaggtgaagaagaatgaggataag
tggccaatgtttagtgacattggtgggaggtattatatattggaggatttgacaagagac
gtgattgcgccgatgcaccagttgaagctactgcatctcatcggaggcaagccttcaaca
gcaattctgttacatgggccaccgggctgtgggaaaaccatgttggctcgagccattggc
aatgaggcccgagttccgttctatgaaacatctgctgttgcgttgaagtctggagtgtca
ggtatcctagagttgttctccagagcatacaacaatgcaccatctattgtgttcattgat
gaaattgatgcattgacttcagaaacggaaagtttgtggcagtgcccagcaaaacagttg
atggcttgcatgaaaagatctaatagtggacctggtggctatgtgctgacgattggagca
accaatagacctgacgctcttgaccttgctttaaggcagcggtttgatcgtgaatttctt
ttagatgttccaaaaaatgatcaacggcatgacatactatcagttctaacaagtaaatat
aaggtcgatgttgattttgatttgaaggagttagctaggttgactcagggttttgtagca
ggagatttggtagaactagtaaataaggctcgtatgatttcttttaattgtgccattcac
atgagagctcacataaagggatttaaagatggatttgaagcttatggtaaaccattttca
gatgaagaattggagcaagtcggattggaccgggaaagtattcatcaagctattgagacg
gtttgggccgtttggccatctgctgaaatggaagaattttccaccacgccatatacaaac
tgggatgatgttggaggccttcaattgttgaaattagaactggaacgtcgcataattaag
cttataaagtttccacaagtttatgagtctctttgggaaagtgggttgaagaactttcca
acctccttctttctttatggtccttcgggttgtggaaagacattgattgttgatgctttg
gctaaagaagcaggagcaaatttaatgcatatcaagggcaatgaactgtcaaagtttgag
tggaggcagttgatggtggataatattttcaaatgtgcaaaaactcaccctccatgtata
gttttctttgatgaggtggacgtgttatcccgagatgatttcacagatgaagatctcgag
gaggacgaatatatatggaagtcgtgggaatatagagcgatatgggcccaaatcagtgat
ttaaaaaaagaatcgcatgtttacgtgattgctacgtcaagtaggctagagattctggag
cgcgtcccgtttatcaaagaagattttggcaggattttgtatgctcctctacctactcca
gaagaaagaggagagatattgaagattcttgctcaaaacaagccaatagatgcagaagtg
gatctgatggctctaggaaaagactccgcatgtgaaaatttcagtggctctgatctgtat
gcattgatgacagaagctattaagtttgccattgatcgaccggcattgtcctgtgggggt
agcatgaccatcacaaatgcagattttgaggctgcgctagctaaagtctccccttctctc
tcggccgaggaacgcaacaaatgggcgctacacgcgaagaatattgatgttgttcatggc
gcatctgtgatggactggtag
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