Salvia hispanica (chia): 125205061
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Entry
125205061 CDS
T09851
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shis03041
]
125205061
Spliceosome [BR:
shis03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125205061
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
125205061
NCBI-ProteinID:
XP_047959820
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All DBs
Position
2:34881610..34886591
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AA seq
456 aa
AA seq
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MSTSAQPQFRYTQTPSKVLHLRNLPWECIEEELIELCKPFGKIVNTKCNVGANRNQAFVE
FSDLNQAINMVTYYASSSEPAQIRGKTVYIQYSNRHEIVNNKSPGDVPGNVLLVTIEGVE
AGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYSDIQTASTARDSLDGRSIPRYLL
PSHVNECYLRISYSAHTDLNIKFQSHRSRDYTNPHLPVNPTAMDGLHQPVVGPDGKKKEF
ESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKIAIFEKNGGTQALIQYPDIAIAAVAKD
ALEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTIPMQQATGWQNPPAAPAVGYTS
GGVQQVHAQAAPSSSWFPTMPAGVQTYMSSPSSFPGQAYGAAPPPAYAAAAIPPFSSPNA
HPPPGAPQTGGSVPLHQPNGPPGGSPHPSQSPYYGS
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacatcggcgcagccgcagttccggtacacgcagacgccgtcaaaggttctccac
ctccggaatcttccatgggagtgcatcgaagaggagctcatcgagctctgcaaacccttt
ggcaagattgtcaacaccaagtgcaacgtcggggcaaatcggaaccaagcctttgtcgaa
ttctccgatcttaaccaggccattaatatggttacatactatgcatcgtcttcagagcct
gcacagatccgtgggaagactgtgtatatacagtactcgaacagacacgaaattgttaat
aacaagagccccggagatgtgccgggaaatgttttgctagttaccattgagggcgttgaa
gctggtgatgtcagcatcgatgtcattcacttggtattctcggcttttggttttgtccac
aaaattgctacatttgaaaaggctgctggttttcaggctttaattcagtatagtgatatt
cagactgcatctacagcaagggattcattagatggaagaagcatacccagataccttctt
ccaagtcatgtaaatgagtgttatttacgcatatcgtactctgctcacacagatttgaat
attaagtttcaatctcatcgaagcagagattatacaaatcctcatcttcctgtaaatccg
actgccatggatggtttacatcagcccgttgtaggccctgatgggaagaaaaaagaattt
gagagtaacgtgctacttgcttctattgagaatatgcagtatgctgtcacagtggatgtt
ctgaatacagtattctctgcttttgggactgtccagaagattgcaatttttgagaagaat
gggggaacgcaggcactgattcagtatcctgacattgcgattgcagctgttgcaaaagat
gctttagaaggtcattgcatatatgatggtggctattgtaagcttcatctatcatactct
cgtcatactgatctcaatgtgaaggcatacagcgacaaaagtagagattacaccatcccg
atgcagcaggctaccggatggcaaaaccctccagccgctccagcagttggctacacttcc
ggtggcgtacaacaggttcatgctcaggcagcgccatcgtcatcatggttccctaccatg
ccagccggcgtacaaacctacatgtcgtctcccagctcatttcctggtcaagcatatggt
gcagcccctcctcctgcttatgcagccgcagctattccacctttcagctcgccaaatgct
catcctccccccggagctccccagaccggaggctccgtgcccttgcatcagccgaacggc
cctccgggtggatctcctcatcctagtcaatccccatactacggttcatga
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