Salvia hispanica (chia): 125205204
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Entry
125205204 CDS
T09851
Name
(RefSeq) uncharacterized protein LOC125205204
KO
K08518
syntaxin-binding protein 5
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shis04131
]
125205204
Membrane trafficking [BR:
shis04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
125205204
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
125205204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
WD40
WD40_CDC20-Fz
WD40_Prp19
WDR55
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_VPS8
TFIIIC_delta
NBCH_WD40
DUF3381
NTP_transferase
Motif
Other DBs
NCBI-GeneID:
125205204
NCBI-ProteinID:
XP_047959984
LinkDB
All DBs
Position
2:complement(1676650..1689614)
Genome browser
AA seq
1033 aa
AA seq
DB search
MFAKLFQKPTQPQPSPSSQPDVTQQTTASSELAPLVAVHYGIPSTASTLAFDPIQGLLAV
GTLDGRIKVIGGDNIEALLISPTALPFKYLEFLQNQGFLASVSNENEIQVWDLGMRCISS
KIKWESTITAFSVISGTNYIYLGDEYGFLSVLKYDAEEKNISPLPYHIPPNLIAEGSGIT
LPDHQSIVGVLSQPCLSGNRVLIAYENGSIILWDVTQDKAVHVKGYGDLQLGGGAVVNFS
DNESHTHLNDSLDNEETEKEISSLCWVSPDGSVLAVGYVDGDILLWNLSASDSDKGQNSQ
KSPDDVVKIQLSSGDKKLPVIVLHWSSSKAHNGYGGQLFAYGGVDIGAEEVLTILDLNWS
SGLSRLKCIDRVDLTLHGSFADLLVISNSYKADQSNSTSFFVLTSPGQLHFYEYASLSML
KSERGKNHCMEASQYNSLIPTVEPYMTVGKLYMMGSEGNVLGSLSKAFTPTKQHPDKMLT
GGSAMWPLRGGVPCQISTSECYTVERIYIGGYHDGSVRIWDASLPVLSLVSVLGSEVKVF
EVTGANAPISALDLYPPNLTLAVGNESGLIFLYQLKGDSYQATVTIVTETKHQVHHCLPQ
EGNYCSTIYSILSSPVCALRFATSGVRLVAGFECGQIAVLDTGSASVIFVTDCISNSKSP
ITSLSVRTCPTRHNLADKSDNETESAPGPEVVFVLTKDAQMVLMDCSTGNMISSQPTHPK
EKSIAISMHILDQRHLGEGSKNSFTYSQHTDAQSEASISIHKNQSGLPNAIAVESDFGNK
MVASQILLCCEEAFYFYTLESLIQGDNNYFNKIEHGKQCSWSTVIKRDAERYGVVVFYQS
GEIELRSLPDLKVLGENSLMSILRWNFKNKMDKTISASEEGQITLVNGCEFALVSLMAYA
DEFRIRKPLPSLHDEVLAAAADADVNYFQNQKKEERALPGFVNNLIKGLKGDKEEQHMDN
AKGREMVIAHLESIFSRFPFSEPFSFEDLELQIDDLDIEEPVPYVASSQKSTGGSKGEEP
VPYVSSFSHSEVY
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgttcgctaaattattccaaaaacccactcagcctcaaccatcaccttcttcccagcca
gatgttactcagcaaacgacggcgtcttctgaattggcaccgcttgtcgctgttcactat
ggcatcccatcaactgcatcgactcttgcttttgatcccattcaaggcctcttggcagta
gggactctggatggcaggattaaagtgattggtggtgacaacattgaagctcttcttatc
tctcctacagctttaccgtttaagtacctagagttcctgcaaaaccaaggttttctagcg
agtgtctccaatgaaaatgaaatccaggtatgggatcttgggatgaggtgtatatcttct
aagataaaatgggaatccactataactgcgttttctgttatctccggaaccaattacata
tatcttggagatgagtatggcttcctgtcagtgctaaagtatgatgctgaagaaaaaaac
atttctccattaccataccacattcctccaaatcttattgctgaaggatctgggattaca
ttgcctgatcatcagtccattgttggcgtgctctcacaaccttgtttgtctgggaatagg
gttttgattgcttatgaaaatggttcgattattctgtgggatgttacacaagacaaagct
gtccacgttaaaggctatggagatctgcaacttggaggtggtgcagttgtcaatttttcc
gacaatgagagccacacccatctgaatgattctttagataatgaagaaacagaaaaggaa
ataagctctctgtgttgggtgtcacctgatggatccgtattagctgttggttatgtggat
ggagatattttattatggaacttatcagcttctgacagtgataaaggtcagaattctcag
aagtcacctgatgatgttgttaagatacaactgtcatcaggggataagaagcttcctgtc
attgttctccattggtcatccagcaaagctcataatggttatggaggtcaactctttgca
tatggtggagtagatattggagctgaagaagtattaacgatccttgacctcaactggtct
tctgggttatcaagattgaagtgcattgaccgtgttgacctcaccctccatggatctttt
gcagatcttcttgtaatatcaaacagttataaggcagaccaaagtaatagcacgtcattt
tttgttttgaccagtccagggcaattgcatttttatgaatatgcttcactgtctatgtta
aagtctgagagaggaaagaatcattgtatggaagcctcacagtataattcactcataccc
actgtagaaccatatatgactgtgggtaagctttatatgatgggttcagaggggaatgtt
cttggttcactctcaaaggcatttacccctacaaagcagcatccagataaaatgctgacc
ggtgggagtgcaatgtggcctcttagaggtggtgttccttgtcaaatttctacaagcgaa
tgctatactgttgagagaatttatattggagggtatcatgatgggtctgtacgaatctgg
gatgccagtttgcctgttctgtcacttgtttctgttttaggatctgaggtaaaggttttt
gaagttactggtgctaatgctccaatatcagcattggatttgtatcctccaaacttaacc
ttagctgttggcaacgaatctggtttgattttcctttatcagctgaaaggagactcttat
caagcaactgtcaccattgtaactgaaacaaaacatcaagttcaccattgcctacctcaa
gagggaaattattgttcaaccatatattccatccttagttctcctgtgtgtgccttaagg
tttgctacttctggagtcagacttgttgctggatttgaatgtggacagatcgcagtgctt
gacaccggttcagcttcagttatatttgttacggactgtatatctaactcgaagtctcct
atcacatctctgtctgttagaacatgtccaactcgtcataacctggctgacaaatctgac
aatgaaactgaaagtgcacctggtccagaggttgtgtttgtcctgaccaaagatgctcag
atggtcttgatggactgttccacaggcaatatgatcagttcacagccaacgcatccaaag
gaaaaatctatcgcaataagcatgcatatattagaccagcgtcatcttggtgaagggtcc
aaaaattctttcacatactcccagcataccgacgctcagagtgaggcttcaatatccatt
cataagaatcagagtggtttaccaaatgctatagcagtggagtctgattttgggaacaag
atggtggcatctcaaattctactttgttgtgaggaagccttctacttttacactttagag
tctttgattcagggggataataactatttcaacaaaatagaacatggaaaacaatgttcc
tggagtacagtcatcaagagagatgcagaaagatatggagtggtagtattctatcaaagt
ggagaaattgaactaaggtctttaccagatcttaaagtgctgggtgagaactcattgatg
tcaatactaaggtggaacttcaagaacaaaatggacaagacaatcagtgcttccgaggaa
gggcagattacgctggtcaatggttgtgaatttgctcttgtatctcttatggcatatgcg
gatgaattcaggattcgtaagccgctgcctagcctacacgatgaagtccttgctgcagct
gccgatgctgatgttaactacttccaaaatcaaaagaaggaagagagagctctgcctggg
tttgtgaataatctgataaagggtttgaaaggtgataaagaagagcaacatatggataat
gcaaaaggtcgtgagatggtgattgctcatttagaatctatattctcacggtttccgttt
tctgaaccctttagttttgaagacttggaacttcaaatagatgaccttgatattgaagag
cctgttccttatgtagcatcttcacaaaagagcaccggtggctcaaaaggtgaagagcct
gttccttatgtatcatcattttctcattcagaagtctattga
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integrated database retrieval system
