Salvia hispanica (chia): 125205255
Help
Entry
125205255 CDS
T09851
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18-like
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shis03009
]
125205255
Enzymes [BR:
shis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125205255
Ribosome biogenesis [BR:
shis03009
]
Eukaryotic type
Pre-60S particles
Helicases
125205255
BRITE hierarchy
Motif
Pfam:
Helicase_C
DUF4217
DEAD
RNA_pol_Rpc4
Motif
Other DBs
NCBI-GeneID:
125205255
NCBI-ProteinID:
XP_047960042
LinkDB
All DBs
Position
2:2172805..2175808
Genome browser
AA seq
430 aa
AA seq
DB search
CYLFKLVKQILILDEADRLLDMGFQKQVSSIISRLPKLRRTGLFSATQTEAVEELARAGL
RNPVRVEVRSEIKRPKDVTSSQQIASSKTPSGLQMQYFQCEADQKPQQLIDLLLKNKAQK
IIIYFMTCACVDYWGAVLPRLSLLKGFSLIPLHGKMKQAAREKALSSFTSLSSGILLCTD
VAARGLDIPGVDCIIQYDPPQDPNVFIHRVGRTARMGRQGTAIVFLLPKEEAYIEFLRIR
RVPLEERQCSDEAPDIIPQIRLAAKKDREIMEKGVKAFVSYVRAYKEHQCSFIFRWKDLE
IGKLGMGYGLLQLPAMPEVRHYSLSTQGFVPVEDIKLEDIKYKEKSREKQRKKNLVAKQA
AKEQKKQQSKATTKASSSVATSKKTAKQRRAVQSTDDADELERDYRLLKKLKKGRIDENE
FAKLTGTEEL
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
tgttacttgtttaaacttgtgaaacagatattgattctggatgaagctgatcggttgtta
gacatgggattccagaaacaggtaagttcaatcatatctcgcttaccaaagcttcggagg
accggccttttttcagctactcaaactgaagcagttgaagagctagccagagcaggatta
aggaatcctgtgagggtagaagtgcgatccgaaataaaaagaccaaaggatgtaacctct
tcacagcaaattgcctcttctaaaactccttcagggctccaaatgcagtattttcagtgt
gaagcagaccagaaacctcaacagctcattgatcttctcctaaaaaacaaagcccagaaa
ataattatctatttcatgacttgtgcctgtgttgattactggggagctgtacttccacga
ctttccttattgaaaggattctctctgatccctcttcatggaaagatgaagcaggctgca
agggagaaggcattatcatcatttacatctctttcaagcggcattcttctttgcactgat
gtagcagcccgagggcttgacattcctggtgttgactgcattatacagtatgacccccca
caggatcctaatgtgttcatacacagagttggccgaactgcccgaatgggacgacaagga
actgctattgtgttcttgttaccaaaggaggaggcatacattgaattcctcaggataagg
agagttccactcgaagagagacaatgttcggatgaggctcccgatatcataccccagata
cgtttagcagccaaaaaggaccgtgaaattatggagaaaggagtcaaggcctttgtatct
tatgttcgtgcttataaagaacaccaatgttcttttatcttcaggtggaaagatcttgaa
atcgggaagttggggatgggatatggactgttgcagctcccagcgatgcctgaagtaagg
cactactctctatccacccaaggttttgttcccgttgaagatataaaactggaggatatc
aagtacaaagaaaagtctcgggagaagcaaaggaagaaaaacctggtagcgaaacaggct
gcaaaagagcaaaaaaagcagcagtcaaaagcaacgacgaaagcttctagctctgtggcc
acaagtaagaaaacagccaaacagagacgagcagttcaatcaacagatgatgcagatgag
ttagaacgggattatcgcctcctgaagaaattgaaaaaaggtaggatcgatgaaaatgaa
tttgcaaaattaactggaacagaggaattatga
DBGET
integrated database retrieval system
