Salvia hispanica (chia): 125205303
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Entry
125205303 CDS
T09851
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z32-like isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
shis
Salvia hispanica (chia)
Pathway
shis03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125205303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shis03041
]
125205303
Spliceosome [BR:
shis03041
]
Common components
Common spliceosomal components
SR proteins
125205303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_5
RRM_5
zf-CCHC_3
RRM_occluded
CLIP1_ZNF
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
125205303
NCBI-ProteinID:
XP_047960101
LinkDB
All DBs
Position
2:complement(8425155..8428989)
Genome browser
AA seq
304 aa
AA seq
DB search
MPRYDDRYGTSTRLYVGHLSSRTRSRDLEHVFSRYGRVRDVDMKRDYAFVEFSDPRDADD
ARYNLDGRDVDGRRITVEFAKGVPRGPGGVREYEGRGPAPGSGRCFNCGIDGHWARDCKA
GDWKNKCYRCGERGHIERNCQNSPKKNSSGRGRSYSRSPVRSRSPRRGGRSRSRSFSRSR
SYSRSRSPAARRGRDADYKERSRSPRDESPDLKRVASPTKSRKLSPTPDMDAPRERSASP
SRGRVEREQDGYNSDSPKETSRSPVSPAGRRYDESPYEENGRNRSPSPGEDRSPAEDEDA
VRSP
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgctatgatgatagatatgggaccagtactcgcctctatgttggtcacttgtcc
tcacggacccgatcccgggatcttgagcatgtttttagtagatatggaagagtacgtgat
gtggatatgaagcgtgactacgcgtttgttgaattcagtgatccacgggatgctgatgat
gctagatataacttggatgggcgtgatgttgatggacgccgcattactgtggaatttgcc
aagggtgtaccacgtgggcctggaggagttcgggagtatgagggcagaggtcctgctcca
ggttctggtcgctgcttcaattgtggcattgatggtcactgggctcgtgattgtaaagct
ggagactggaagaataagtgttaccgctgtggggaaagaggtcacattgagaggaactgc
caaaacagtcctaaaaagaatagtagtggacgtggtcgaagttactcacgatctcctgtg
aggtcacgttcccctcgccgtggtggccgcagtaggagtagaagcttcagcagaagccgc
agttacagccggtcaaggtcccctgctgccagaagaggacgtgatgctgattataaagag
aggtcaagaagccctcgtgatgaaagcccagatcttaaaagggttgcctctcctactaaa
tcaaggaagctcagtccaacgcctgatatggatgcgccaagagagcgaagtgcttctcct
agtagaggcagagtggagagagagcaagatgggtacaatagtgatagcccaaaggagact
agccgtagccctgtgagtcctgctggtaggaggtatgatgagagtccttacgaggaaaat
gggcgcaatcgcagccctagccctggagaggatagaagtcctgctgaggatgaagacgca
gtacgctctccctga
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