Salvia hispanica (chia): 125205323
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Entry
125205323 CDS
T09851
Name
(RefSeq) two-component response regulator ARR1-like isoform X1
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
shis
Salvia hispanica (chia)
Pathway
shis04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
125205323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shis03000
]
125205323
Transcription factors [BR:
shis03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
125205323
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
DNA_pol_phi
PHD20L1_u1
Motif
Other DBs
NCBI-GeneID:
125205323
NCBI-ProteinID:
XP_047960140
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Position
2:complement(32512696..32516513)
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AA seq
670 aa
AA seq
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MNLGVNSMSVTTSSASWKSDAVSDQFPAGLRVLVVDDDPTCLRILEKMLRNCRYEVTTCG
RAEVALKLLRDNKDGFDVVISDVHMPDMDGFKLLERVGLEMDLPVIMMSADDSKSVVMKG
VTHGACDYLIKPVRMEALKNIWQHVVRKKKNEWKEKDAEQSGSVEEGDRQQKPTDDADYS
SSANEGNWRNSRKRKEEEDDGDDKDDSSTLKKPRVVWSVELHQQFVTAVNQLGIDKAVPK
KILELMNVPGLTRENVASHLQKYRLYLRRLSGQPQNGLGNSFLGPQDSGFGSISSLNGLD
LQAYASSGQIPAQSLASIQAAALGRVTNKSGIVDQRNIFSFDNPNMRFLDGQQHHSNGKQ
VNLLHGIPTNMDSKQLAALHQSGQPFGNTLMNVHSQSGQSNSLLTQMVQPQSRTQMLNEV
GGNPVLNFPSSVGQPGLSQAIPGSVFSRYGMDNNNVRPLTYTSLSQPTSVVEFSRSQGME
LSGNSIPLTSNSGIPSYTSKGTTLQEEVNSEIKGSRGFLPNFDAFNELSQNRTDTWDLQN
VGSTFETPQHSNIQSRLDVAPSVLVQPAFTSDHRNGHIRTTSVNKAAFSAATSLGNGTNF
GQQLTPSHADSALRIKTERLPDMGFQNSLFPDQLGQDDLMSTLLKQQQDGLAPVENEFGF
DEYQLDNLPV
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttggagtcaattccatgtctgtaactacttcaagtgcttcttggaagtccgat
gcagtttccgaccagtttccggcgggtttgagggttctcgtcgtcgacgatgaccccact
tgtcttaggatcttggaaaagatgctgagaaattgccgctatgaagttaccacatgcggt
cgagctgaggttgcgttgaagttacttagggataacaaggatggattcgacgttgttata
agtgatgtccacatgcccgacatggatggttttaagcttttggagcgcgttggattggag
atggatctaccggtcatcatgatgtcggctgatgatagcaaaagtgtggtgatgaagggt
gtcactcatggtgcttgtgactatctgatcaaaccggttcggatggaggcgttgaagaac
atatggcagcatgtggttcgtaagaagaagaatgagtggaaggagaaggatgcagaacag
tcgggaagtgtggaagaaggagatcggcagcaaaagcctactgacgatgctgattactct
tcttcagctaatgaaggaaattggagaaactcgagaaagaggaaggaagaggaggatgac
ggtgatgacaaggatgattcatctacattgaagaaaccgcgcgttgtttggtctgtggag
ctgcaccagcagttcgtaactgctgttaatcaacttggaatcgacaaggctgtgccaaag
aaaatcttggaattgatgaacgtcccgggcctcacaagagagaatgttgcaagccacctt
cagaaatatcgtctttatcttagaaggcttagtggacagccccagaatggactcgggaac
tcgtttcttggaccccaggattcaggttttggctcaataagttcgctcaacggcctcgat
cttcaagcttatgcttcttcgggtcaaataccagctcaaagtcttgcttcaatccaagct
gcagcacttggtagggtgaccaacaaatcgggtatagttgatcaacgcaacattttcagc
ttcgataatccaaacatgaggtttctagatgggcagcaacaccatagcaatggtaagcaa
gtgaatctactccatggcatccctacgaatatggattcgaaacagcttgctgctttgcac
cagtctggacagccctttggtaatacgcttatgaacgtgcactcccagtcaggccaaagt
aattctttactcacgcagatggttcaaccacagtcgaggacacaaatgttgaacgaagtt
ggtggtaacccggtcttgaattttccatcatcggtagggcaacctggtttgtctcaggcg
attcccgggtccgtctttagccggtacggaatggataataacaatgttcgtcctctgaca
tacacgtccctttcccagcccacgtctgtagtagaattttcgaggagtcagggcatggag
ttatccgggaattcaattccactcactagtaactcaggaatcccaagttatacctctaaa
gggacgacgctccaagaagaggtgaactctgaaattaaaggatctcgaggctttctaccc
aattttgatgcgttcaacgagctcagccagaacagaaccgacacttgggacttgcaaaat
gttggatcaacctttgaaactcctcaacattccaatattcaaagccgtctggatgttgca
ccgtcagttttagtccaaccagcatttacctctgatcataggaatggacatatccggact
acatctgttaacaaggcagctttctcagctgctaccagtcttggcaacggcacaaacttc
gggcagcagctcacaccatcacacgctgatagtgctctaagaatcaagactgaaagacta
cctgacatgggcttccaaaacagcctctttcccgatcaattgggccaagacgacctcatg
agcacgctcctcaagcagcagcaagacgggttggcgccagtggaaaatgagtttggcttt
gacgaataccaactggataatcttccggtttag
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