Salvia hispanica (chia): 125205375
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Entry
125205375 CDS
T09851
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
shis
Salvia hispanica (chia)
Pathway
shis03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125205375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125205375
03036 Chromosome and associated proteins [BR:
shis03036
]
125205375
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125205375
Chromosome and associated proteins [BR:
shis03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
125205375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
WSN
Motif
Other DBs
NCBI-GeneID:
125205375
NCBI-ProteinID:
XP_047960221
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All DBs
Position
2:complement(21125353..21131753)
Genome browser
AA seq
1045 aa
AA seq
DB search
MEVNLAVLKPTSIHESQYKRRRVSLNGADTSLSCQVLHDAENSLPTLRCSDYYTKPCLSE
LAIREFSNPGYCSRVEDFVIGRIGYGCVKFIGETDVRRLDLDSIVKFRKCEIVIYEDDSS
KPLVGHGLNKPAEVTLLLQTKPLSNLNETQLAKIVEKLKCKTESQGARFISFNPDNREWK
FLVQHFSRFGLVEEDEDEDDVPMDDVSPGAQDPEGMNGNEVSDDEDNASPDMSLLSHSLP
AHLGLDPVRMQDMRMLWFPAKEDEVEALTNKHPYDNPPFAKDSSRSPLHHSSRKTVHNSN
TPSIRKTPLALKEFNPGGFSSTSSGAILLSQQNKGLHLTTRKSEGFELELTKKTPVTGNH
SCNIVDAALFMGRSFRVGWGPNGILVHSGMPVGSDNSRAVLSSVINIEKVALDKVTRDDS
NKVKEELTDFCFSSPLNIHKELSRETKKVELGTYNLKLQKLICDRLTLPDICRSYIDIIE
KQLEVPSLSSDTRVLLMHQVLVWELIKVLFSTRKMGGQLKLIEEEEEDMISDARESYPDV
DQEALPLIRRAAFSYWLQESVHHRVQEDISSLNELSGLEHIFLLLSGRQMDAAVELAASR
GDVRLSCLLSQAGGSTTNRADIAHQLDLWRKNGLDFSFIEDDRVRLLELLSGNIHRALHG
VKIDWKRFLGLLMWYKLPPDISLPVVFNTYQKLLNEGDAPYPVPVYIDEGPIEDVSKWVL
NNRFDLAYYLMLLHAREENDFGALKTMFSASASTYDPLDYHMIWHQRAVLEAIGTFSSND
LHVLDMAYVSQLLCLGQCHWAIYVVLHMPHREDYPYLQATVIREILFQYCEVWSTSDSQW
EFIESLGIPLAWLHEALAIFHSYTGDLPKALGHFLACASWQKAHSIFLTSVAPSLFLSAK
HTEIWELATSMEDYKSEIEDWDLGAGIYISFYILKNSLQEDNSTMTELDTLENKNDACAD
FISRLNKSLAVRGNKLSVEARVVFSKMAEEISSLLLSDSNEGSTGEDQLICFETVFRAPM
PEDLRSYHLQDAVSLFTCHLSELAQ
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggaagttaatttagctgtgctaaagcctacttcgattcatgagtctcagtacaaaaga
agaagagtttctttgaatggtgcagatacttctctttcctgtcaggtcttacatgatgct
gaaaattctttaccaaccctccgttgttctgattactacacaaagccgtgcttaagtgag
ttggctattcgtgagttctcaaaccctggttattgcagtagagttgaagattttgtcatt
ggaaggattggttatggatgtgttaagtttatcggggaaacagatgttagacgcttggat
ttggattccattgtcaagtttagaaaatgtgagattgttatatatgaagatgacagttct
aaaccgttggttgggcatggtcttaacaagccagctgaagtaactctactacttcaaaca
aagccattgagtaatctaaatgagacgcagttagcaaaaattgtggaaaaattgaagtgc
aagacagaaagtcaaggggcacgtttcatttcatttaatccagataaccgtgaatggaaa
tttttggtacaacattttagcagatttggcctggttgaggaagatgaagatgaagatgat
gttccaatggatgatgtgtcccctggagctcaagatcccgaaggtatgaatggtaatgag
gtatccgatgatgaggataatgcttcaccagacatgagtcttctttcacattctcttcct
gctcatcttggtcttgatcctgtcaggatgcaagacatgaggatgttgtggtttcctgcc
aaggaagatgaggtagaggctcttactaacaaacatccatatgataatccaccttttgct
aaagattcctcaagatctcctttgcatcattcatctaggaagacagttcacaattcaaat
accccttccattcgcaaaactccattagctttaaaagagtttaaccctggcggttttagc
tctacctcctctggagccattttattgtcccaacaaaataaaggtttgcacctaaccacg
agaaaatctgaaggcttcgagctggagcttacaaagaaaacaccagtaactggcaatcat
tcttgtaatatagttgatgcagcactatttatgggaagatcctttcgagtaggttggggc
ccaaatggcatacttgtgcattctggtatgcctgttggtagtgataattcccgtgctgta
ttatcctctgtaataaatattgaaaaggttgcacttgacaaagtgacaagagatgacagc
aacaaagttaaggaggaacttactgacttttgtttcagctcccccctcaatattcacaag
gaattgagtcgtgaaacaaaaaaagttgaactaggaacctataatctcaaacttcaaaag
cttatttgcgaccgcttgactcttccagatatttgtcggagctatatagacatcattgag
aagcaactagaggtgccaagcttatcatctgacactcgcgtcctactgatgcaccaagtg
ctggtttgggaattaattaaagtgctcttttcaacaaggaaaatgggtgggcaattgaag
ctcattgaagaggaggaggaggatatgatttcagatgcaagggaaagttatccagatgtt
gaccaggaagcacttccacttattagacgagctgctttcagctattggctgcaagagagt
gttcaccaccgtgtacaagaagatatcagttcgctgaatgagttgagtggtctagaacac
atatttttgcttctttctggcagacagatggacgctgccgtagagcttgctgcttctaga
ggggatgtacgactatcttgtctcttaagccaggctggtgggtccacaaccaatcgtgct
gatattgctcatcagcttgatctttggaggaagaatggactggattttagtttcattgag
gatgatagggtgaggcttcttgaattactctctggcaacattcatcgggccttacatggt
gtaaaaattgactggaaaaggttcctaggactgttgatgtggtataaacttccacccgac
atttcgttacctgttgtttttaacacttaccagaagcttctgaatgagggagatgctcca
taccctgttccagtttacatagatgaaggacctatagaagatgtgagcaaatgggttttg
aataaccgttttgacctagcttattatcttatgcttcttcacgcccgggaagaaaatgat
tttggtgctttaaagaccatgttcagtgcctctgcttcaacatacgaccctcttgactat
cacatgatttggcatcagcgtgctgttttagaagccattggcactttcagttcaaatgat
ctacatgtccttgacatggcatatgtttctcagttgctctgccttgggcaatgccattgg
gccatctatgtggtacttcatatgcctcaccgtgaagattatccttatcttcaagctaca
gttataagagaaatcctctttcaatattgtgaagtttggagtactagtgactcacaatgg
gaattcattgaaagtctaggcattcctttagcatggttgcatgaagctttggcaatattt
cacagttacactggggaccttccaaaggctctaggtcactttcttgcatgtgcaagctgg
cagaaagcacactctattttcttaacttcagttgctccgtctttgtttttgtcagcaaag
catacagaaatatgggagctagcaacatccatggaggactacaagtcggagattgaagat
tgggaccttggggcaggaatttatatttcattctatatattgaagaattccttgcaggaa
gacaatagcaccatgactgaactggacactcttgagaacaagaatgatgcatgtgctgac
tttattagccgtttgaacaagtctctggcagttcggggcaacaaattatcagtcgaagca
agagtcgtattctcaaagatggcggaagagatctccagtctgcttctttctgatagcaac
gagggttccacaggcgaggatcagctgatctgcttcgaaactgtttttcgggcacctatg
ccggaagacctccgctcatatcatttacaggatgctgtttcacttttcacttgtcatctt
tctgaactggcacaataa
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integrated database retrieval system
