Salvia hispanica (chia): 125205429
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Entry
125205429 CDS
T09851
Name
(RefSeq) thioredoxin-like protein YLS8
KO
K12859
U5 snRNP protein, DIM1 family
Organism
shis
Salvia hispanica (chia)
Pathway
shis03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125205429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shis03041
]
125205429
Spliceosome [BR:
shis03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
125205429
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Gene cluster
GFIT
Motif
Pfam:
DIM1
Thioredoxin
Thioredoxin_7
Thioredoxin_8
DUF3192
Motif
Other DBs
NCBI-GeneID:
125205429
NCBI-ProteinID:
XP_047960309
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Position
2:8477500..8479673
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AA seq
142 aa
AA seq
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MSYLLPHLHSGWAVDQAILAEEERLVLIRFGHDWDETCMQMDEVLASVAETLKNFAVIYL
VDITEVPDFNTMYELYDPSTIMFFFRNKHIMIDLGTGNNNKINWAMKDKQEFIDIVETVY
RGARKGRGLVIAPKDYSTKYRY
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatttgctgcctcaccttcactccggctgggccgtcgatcaggctatcctggcg
gaggaggagcgcctcgtcctcatccgcttcggccacgattgggacgagacctgcatgcag
atggatgaggtactggcttctgttgccgaaacactaaagaattttgctgtcatatacctg
gtggatatcacagaggtcccggatttcaacacaatgtacgagctgtatgacccctccacc
atcatgttcttcttcaggaacaagcacattatgattgatcttggcactggaaacaacaac
aagatcaactgggccatgaaggataagcaagagttcattgacatcgttgagactgtctac
cgtggcgccaggaaggggcgtggtctggtcatcgcccctaaggattattccaccaaatat
cgttattga
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