KEGG   Salvia hispanica (chia): 125205429
Entry
125205429         CDS       T09851                                 
Name
(RefSeq) thioredoxin-like protein YLS8
  KO
K12859  U5 snRNP protein, DIM1 family
Organism
shis  Salvia hispanica (chia)
Pathway
shis03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:shis00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125205429
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:shis03041]
    125205429
Spliceosome [BR:shis03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    125205429
SSDB
Motif
Pfam: DIM1 Thioredoxin Thioredoxin_7 Thioredoxin_8 DUF3192
Other DBs
NCBI-GeneID: 125205429
NCBI-ProteinID: XP_047960309
LinkDB
Position
2:8477500..8479673
AA seq 142 aa
MSYLLPHLHSGWAVDQAILAEEERLVLIRFGHDWDETCMQMDEVLASVAETLKNFAVIYL
VDITEVPDFNTMYELYDPSTIMFFFRNKHIMIDLGTGNNNKINWAMKDKQEFIDIVETVY
RGARKGRGLVIAPKDYSTKYRY
NT seq 429 nt   +upstreamnt  +downstreamnt
atgtcgtatttgctgcctcaccttcactccggctgggccgtcgatcaggctatcctggcg
gaggaggagcgcctcgtcctcatccgcttcggccacgattgggacgagacctgcatgcag
atggatgaggtactggcttctgttgccgaaacactaaagaattttgctgtcatatacctg
gtggatatcacagaggtcccggatttcaacacaatgtacgagctgtatgacccctccacc
atcatgttcttcttcaggaacaagcacattatgattgatcttggcactggaaacaacaac
aagatcaactgggccatgaaggataagcaagagttcattgacatcgttgagactgtctac
cgtggcgccaggaaggggcgtggtctggtcatcgcccctaaggattattccaccaaatat
cgttattga

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