Salvia hispanica (chia): 125205453
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Entry
125205453 CDS
T09851
Name
(RefSeq) protein EXPORTIN 1A-like isoform X1
KO
K14290
exportin-1
Organism
shis
Salvia hispanica (chia)
Pathway
shis03008
Ribosome biogenesis in eukaryotes
shis03013
Nucleocytoplasmic transport
shis03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125205453
03008 Ribosome biogenesis in eukaryotes
125205453
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
125205453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125205453
03009 Ribosome biogenesis [BR:
shis03009
]
125205453
03016 Transfer RNA biogenesis [BR:
shis03016
]
125205453
03036 Chromosome and associated proteins [BR:
shis03036
]
125205453
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
125205453
Ribosome biogenesis [BR:
shis03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
125205453
Pre-60S particles
125205453
Transfer RNA biogenesis [BR:
shis03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
125205453
Chromosome and associated proteins [BR:
shis03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
125205453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
125205453
NCBI-ProteinID:
XP_047960349
LinkDB
All DBs
Position
2:16482678..16496882
Genome browser
AA seq
1083 aa
AA seq
DB search
MAAEKLRDLSQPMDVALLDATVSAFYGTGSKEERAAADHILRDLQHNPDMWLQVVHILSS
AQNLNTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISDVIVKLSSDEVSFRRERLYVNK
LNIILVQILKHEWPARWRSFIPDLVAAAKSSETICENCMAILKLLSEEVFDFSRGEMTQQ
KIKELKQSLNSEFKLIHELCLYVLSASQRAELIRATLATLHAFLSWIPLGYIFESPLLET
LLKFFPVPAYRNLTIQCLTEVAALSFGDFYNMEYAKMYSIFMAQLQAIVPSSTNFVEAYA
NGNSEEQAFIQNLALFFTSFYKCHIRVLESVQENINILLVGLEYLINISYVDDIEVFKVC
LDYWNSLVSELFDSNHNLDSPAGVAHMMGLQMPMLPGMVDGLGSQLLQRRQLYAGPMSKL
RLLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLAHLDHEDTEKQM
LTKLGKQLIGEDFTWNNLNTLCWAIGSISGSMAEEQENRFLVMVIRDLLNLCEITKGKDN
KAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCK
RKFVIVQVGEKEPFVSELLTTLLTTIVDLEPHQIHSFYESVGTMIQAETDPLRRGEYLQK
LMELPNQKWTEIIGQARQSVDFLKDQDVIRAVLNILQTNTSVASSLGMYFMPQISMIFLD
MLNVYRMYSELISTSIAQGGPHASRTSIVKLLRSVKRETLKLIETFLEKAETFTDKAEDQ
QHIGKQFLPPMMDHVLGDYARNLPDARESEVLSLFATIINKYKGTMIENVPRIFEAVFQC
TLEMITKNFEDYPEHRLKFFSLLRAIAAHCFPALVHLSSEQLKLVLDSIIWAFRHTERNI
AETGLNLLLEMLTNFQGSEFCNQFHRTYFLTIEQEIFAVLTDTFHKPGFKLHVLVLQHLF
SLVESAALTEPIWDTATVSYPYANNGMFVREYTVKLLSSSFPNMTATEVTQFVNGLFESK
GDISSFKDHIRDFLVQSKEFSAQDNKDLYAEEAAAQREKERQRMLSIPGLIAPNEIQDEM
VDS
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgaaaagcttcgggatttgagtcagccgatggatgttgctctgctcgacgcc
actgtctctgctttctatggaaccggatctaaagaggagagggctgctgcagatcatatc
ttgcgtgacttacaacataacccagatatgtggcttcaagtggtccacattttatctagt
gctcagaatctgaacacaaaattttttgctttacaggttttggaaggtgttattaagtac
agatggaatgctttacctgtagaacaaagagatggcatgaaaaactatatttctgatgtt
atagttaagctttcgagtgacgaagtctctttccggagggagaggctttatgtcaataaa
ttaaacataatattggttcagatattgaagcatgagtggccagctcgatggcgtagcttc
atacctgatttggttgcagcagcaaaatcaagtgaaaccatctgcgagaattgcatggcc
attctaaaacttctaagtgaggaggtctttgatttttcaaggggtgaaatgactcaacag
aagattaaagagttgaaacaatctttgaacagcgaattcaagctcattcatgagttatgc
ttgtatgtgttgtctgcatcccaaagagctgaactcatcagggctaccttggcaacatta
catgcttttttatcctggattcccttgggctatatatttgaatcaccactgcttgaaact
ctattgaaattctttcctgtgcctgcatatcgcaatctcactattcagtgtctgactgag
gttgctgctcttagttttggggacttctataatatggagtatgccaaaatgtattctata
ttcatggcgcaattacaggcaattgtcccatcgtccaccaactttgttgaggcatatgca
aatggcaatagtgaggagcaggcatttattcagaatttggcactgtttttcacatcattc
tacaagtgtcatatacgagtgctagagtctgtgcaagagaatataaatatactactagtg
ggccttgagtatctaattaatatctcatatgtggatgacattgaagtttttaaggtttgc
ctggattattggaattctttagtttcggagctgtttgattctaatcacaatctggatagt
cctgctggggttgcacacatgatgggactgcagatgcctatgctccccggtatggttgat
ggactaggatcacaactcctgcagaggcgtcaactttatgctggtccaatgtcaaagttg
agattactaatgatatgtcgcatggcgaagccagaagaggttctcattgttgaggatgaa
aatgggaatatagttcgtgagacaatgaaagataatgatgttctagtacagtataagata
atgagggagacactgatttacttggctcatcttgatcacgaggatactgaaaaacagatg
ctgacaaagttgggtaaacaacttattggagaggattttacctggaacaatcttaataca
ctctgttgggccattggatctatttctgggtcaatggcagaggagcaggaaaacaggttt
ctggtgatggtaatccgtgatttgttaaacctttgtgagatcactaaggggaaggacaat
aaagctgtcattgccagtaacataatgtatgtagttggtcaatacccacgatttttgagg
gctcactggaagttcttgaaaactgttgtgaacaaattgtttgaattcatgcatgagacc
cacccaggggttcaggacatggcatgtgatacattcttgaaaattgtccaaaaatgcaag
cgcaaatttgtcatcgtgcaggttggagaaaaagagccatttgtttcggaactattaaca
acacttctgactactattgttgatcttgagcctcaccaaattcattccttttatgaatct
gttggtactatgattcaagccgaaactgatcccctcaggagaggtgaatacctgcagaag
ctgatggaacttcctaatcagaaatggactgaaataattggacaggcacgccagagcgta
gatttcttgaaagatcaagatgtgatccgtgcagtgcttaatatcttgcagacaaatact
agtgttgctagctctcttgggatgtattttatgccacagatttccatgatctttttggac
atgctcaatgtttacagaatgtacagtgagcttatatcaaccagtattgcccaaggaggg
ccccatgcttctcggacatctattgtgaaactcttacgttcagtcaagagggaaacatta
aagctcattgagacatttttagaaaaagctgagacatttacagataaagctgaagatcag
caacatatcggtaaacagtttttgcctccaatgatggaccatgtgctcggtgactatgct
cggaatctgcctgatgcaagagagtctgaagttctatcactatttgcaacaataataaat
aagtacaagggaacaatgattgagaacgttcctcgaatattcgaagctgtattccagtgt
actctagagatgataacaaagaattttgaagactatcctgagcatagactgaagttcttt
tcactgcttagagctattgctgcacattgttttcctgccctagtgcacttgtcaagtgag
caattaaaacttgttctagattctatcatttgggctttccggcacactgaacgaaatata
gcagagactggtctcaacctattattggaaatgctgacaaattttcagggttctgagttt
tgtaaccagttccaccggacttactttttgacaatagagcaagagatatttgctgttttg
acagacacattccacaagccgggttttaagttgcatgtactggtgctgcaacacttattc
agcctggtagaatcagctgcgttaactgagcctatatgggatactgcaacagtttcttat
ccttatgcaaataatggcatgtttgtccgtgagtataccgttaaactgttgagctcatcg
tttccgaacatgacagcaactgaggttacccaatttgtcaatggactttttgagtcaaaa
ggcgatatttcttcattcaaagatcacatacgagattttcttgtccaatcaaaagaattt
tcagctcaggacaataaagatctttatgctgaggaagctgctgcccagagagaaaaagag
cgacagcgcatgctatcaattccaggactcattgcacccaacgagatacaagacgagatg
gtggattcatga
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integrated database retrieval system
