Salvia hispanica (chia): 125205487
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Entry
125205487 CDS
T09851
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1 isoform X1
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
shis01003
]
125205487
Enzymes [BR:
shis01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
125205487
Glycosyltransferases [BR:
shis01003
]
Polysaccharide
Structural polysaccharide
125205487
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
O-FucT
BESS
Motif
Other DBs
NCBI-GeneID:
125205487
NCBI-ProteinID:
XP_047960414
LinkDB
All DBs
Position
2:34380844..34383958
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AA seq
533 aa
AA seq
DB search
MCKLEDGVEAEESHPQWNVGMNILGGKEVAETMYLRLSHARMKLWILRLITTLLIWICIM
QFVAVGEDWGPKLLKSWPSCSIPPIMHDATNVSSFLPKRPHLPPKRVYNNNGYLVVSCNG
GLNQMRAAICDMVSIARHLNITLIVPELDKTSFWADPRSIEITPCTHILYHQCLLLIRFC
YLCCSDFQDIFDVDHFILSLRDEVRILKELPPRLKRRVERGMSHELPPVSWSNLSYYHQQ
ILPLLKRHKVVRLNKTDARLANNGLPLEVQKLRCKVNFNALRFTTPIQELGRKVVRMLRR
KGSFLVLHLRYEMDMLSFSGCTRGCNTNEINELTAMRYSNPGWKEKVIDPDLKRKDGLCP
LTPEETALVLRALGIDPNVQIYIAAGEIYGGKRRLKSLTNAFPNLVTKEMLLEPSDLSFF
KNHSSQMAALDYLVSLESDVFVPTYDGNMARVVEGHRRYLGFKKTILLNRRILVGLIDQY
NEGTLSWDEFSFHVKEAHENRVGSPKKRAIIPDRPKEEDYFYSNPQECLAADT
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaaattggaggatggggttgaggcagaggagagccatccgcaatggaatgtgggg
atgaatatcttgggtggaaaggaagttgcggagaccatgtatttgaggctctctcatgct
agaatgaagctatggattctgagattaatcaccacattattgatatggatatgcattatg
caatttgtggcagttggagaagattgggggccaaagttgttgaagagctggccttcttgt
tccatccctcccattatgcatgatgcaactaatgtgtcttcttttctgcccaaacggcct
catcttccacctaagagagtatacaacaataatggttaccttgttgtttcttgcaatgga
gggctcaaccaaatgcgagcagctatttgtgatatggtttccatagccagacaccttaac
attactctaattgtccctgaattggataaaacatcgttttgggcggatccgaggtcaata
gaaattactccatgtactcacatcctatatcaccagtgtcttttgcttattagattttgt
tatctctgctgcagtgattttcaggatatattcgatgttgatcacttcattctttcattg
agggatgaggttaggatactgaaagaacttccaccacggcttaaaaggagagtagaacgt
ggaatgtcccatgagttgcctcctgttagttggtcgaatctttcttactaccatcagcag
attcttccacttcttaaaaggcataaagttgtacgcttaaataaaactgatgctcgcctt
gccaacaacggattgccactcgaagttcagaagctacgttgcaaagtgaatttcaatgca
ctgagatttactaccccaatccaggagttgggcagaaaagtggtcaggatgctgagacga
aaaggttctttccttgtgctccaccttagatacgaaatggacatgctgtccttttctggc
tgcactcgaggctgcaacaccaatgagataaatgaactgactgcaatgagatattctaac
cctgggtggaaggagaaagtcatagatcccgaccttaaaaggaaagacggtctatgccct
ttgacgcctgaagaaactgctttagtgctgagggctcttggtatcgatcctaatgttcaa
atatacatagcagctggagagatttatggtggcaaaaggcgactgaaaagtttaactaac
gcgttccccaatctggttacaaaggaaatgttgctggagccctctgatttgtcgtttttc
aagaatcactcgtcacagatggctgctctggactatcttgtttcattggagagtgatgtt
tttgttcccacgtacgatggaaatatggctagagttgtagaaggacatcgcaggtattta
ggtttcaagaagactattctacttaacaggagaattttggttggtttgatcgatcaatac
aacgaaggaacgttgagctgggacgagttctcattccacgtgaaggaggctcatgaaaac
cgagtggggagccccaagaagcgcgctataatcccagacagaccgaaggaggaagattac
ttttatagcaacccacaggaatgccttgctgcagatacttga
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