Salvia hispanica (chia): 125205653
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Entry
125205653 CDS
T09851
Name
(RefSeq) myosin-2-like
KO
K10357
myosin V
Organism
shis
Salvia hispanica (chia)
Pathway
shis04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
125205653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125205653
04131 Membrane trafficking [BR:
shis04131
]
125205653
03029 Mitochondrial biogenesis [BR:
shis03029
]
125205653
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
shis04812
]
125205653
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
125205653
mRNA cycle factors
P-body specific factors
125205653
Membrane trafficking [BR:
shis04131
]
Others
Actin-binding proteins
Myosins
125205653
Mitochondrial biogenesis [BR:
shis03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
125205653
Cytoskeleton proteins [BR:
shis04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
125205653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
SH3_VIII-1_N
IQ
Zeta_toxin
Myosin_N
nSTAND3
AAA_22
ATG16
IQ_SCN5A_C
NPHP3_N
AAA_16
ABC_tran
Motif
Other DBs
NCBI-GeneID:
125205653
NCBI-ProteinID:
XP_047960671
LinkDB
All DBs
Position
2:40121679..40132377
Genome browser
AA seq
1161 aa
AA seq
DB search
MSSTGTSLEEMLDSLGQRDGEKPNDMPPALPARPTSRTRLPSNRRAALPDIVEAVMDLSS
LNCVNKDDSKGSRWKSVGAKTVKKVKQGESHYPMAASDESKSVEMLANPPPGSESEWNTD
MEYFIKHKLLVWCRLRNGPWESGEIKSTSGDEVSVLLTNGTVSTFNKLNIFPANPDILQG
VDDLIQLSHLNEPSVLHNIHHRFSQDIVYSKAGPVLVAVNPFKDIQLYGDDFVNGYRQKL
LDSPHVYAVADKAYCEMMTDKRNQSIVISGESGAGKTETAKLVMQYLAALGGGSNGGIES
EFLQTSYILEAFGNAKTTRNNNSSRFGKLIEIHFSDTGKICGAKIQTFLLEKSRVVQLAQ
GERSYHIFYQLCAGAPSCLQGRLMLKRACDYTYLNQSDCLEIHGVDDGQNFSTLMEALNI
IGISKDDQEQAFEMIAAVLWLGNISFHVIDNENHIEVVANEAVKNAANLIGCGIPELMHA
LSTHSIQAGKDKVAKKLTLQQAIDARDSLAKLIHASLFEWLVEKINISLARGKHHTGSSI
RILDIYGFESFKKNSFEQFCINYANERLQQHFIRHLFKIEQEEYESEGIDWEKVDFVDNQ
ECLNLFEKKPLGLVSLLDEESNFPKATSLTFAAKLKQHLSANYCFKGDGAGAFTVCHYAG
EVLYDTGEFLEKNRDPLHSEIIQLFSLCNSQLPQLFASKIIPSQKQSVITKFKDQLFKLM
QQLESTTPHFVRCIKPNSKKVPGEFEKDLVSEQLRCCGILEVVRISRSGYPTRMTHQEFT
RRYGILLPENNICQDPLNTSIAVLQKFDIQPEMYEVGYTKLFFRAGQIGALEDVRGKTLR
GALEIQKCFRRHLAHRSILKLKGGSTALQSYIRGEIVRREYIALLKLKQQVAEQKMDEAV
LQLQSAIRAWMVRRHFSNSQELEESNASEEPEMMISEMQDVQTELPLSAIELQKRLVIAE
MTLVKKERENAVLREKLQQYEAKRLECESKMKSMEEMLHNQMVSLQMSLAAARKSICADI
CSTKSEKYFDNESPWFYDCEEASSQNPSASALIKYSSKGTAASTCGDKGGLELAAPQLEP
KKHKFVDEVRAVMKIKSVSLARMSPRDELQNVKNKLGAWKTDIKGKLKDAKAKSQKPGHA
DGEKVHRKWNDLVPQRRFSLR
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcaactgggacctccttagaggaaatgctggattctctggggcaaagagacggt
gagaagcccaatgacatgcctccggccctcccggcacggccgacctctcgcactcgcctt
ccatcgaacaggcgggcagcgctgcctgacattgttgaagccgtgatggatctgagctca
ttaaactgtgtgaacaaggatgattccaaaggctctaggtggaagagtgttggggcgaaa
actgttaaaaaagtgaaacagggggaatcacactaccccatggctgcttcagatgagtcc
aagtccgtagagatgcttgccaaccctcccccagggtcggagtccgagtggaacacggat
atggagtattttatcaaacataaacttcttgtttggtgtcggctacgaaatggcccatgg
gaatcaggagaaataaaatctacttcaggcgatgaagtctctgtccttctcacaaacgga
actgtttccacgttcaacaaactgaatatttttcctgccaatccagacattcttcagggg
gtggatgatcttatccaacttagtcatttgaatgagccttcggttcttcataatattcac
cacagattttctcaagacatagtatatagtaaggcaggacccgttttagtggcagtcaat
cctttcaaagatatccagctatatggggatgactttgttaacggttatcgacagaagctt
ctagacagccctcatgtttatgctgttgctgacaaagcatactgtgaaatgatgacagat
aaaagaaaccagtccattgtgataagtggggagagtggggctgggaagactgaaactgcc
aagttagtgatgcaatatttggctgcacttggtggaggtagtaacggtggaatagaatct
gagtttctgcaaacaagctatatattggaagcctttggcaatgctaaaacaaccaggaat
aacaactccagccgatttggaaagttaatcgaaatccattttagtgatactggaaaaatt
tgtggtgctaaaatacagactttcctgcttgaaaagtcaagagttgttcagttggctcaa
ggagagaggtcctaccatattttctatcagctttgtgctggggctccttcttgtctccaa
ggtagactgatgttaaaaagggcttgtgattacacctatctcaatcaaagtgattgctta
gagatccatggtgttgatgatggccagaatttttctactcttatggaagcgctaaatatt
attggaatatccaaagatgaccaagagcaggcctttgagatgattgctgcagtattgtgg
ctgggaaacatatcatttcatgtcattgacaatgaaaaccacatagaggttgttgccaat
gaagctgttaaaaatgctgctaacctgattggctgcggtattccggagttaatgcatgct
ctatcaacacatagcatacaagctggaaaagataaagttgccaaaaagctgacactacaa
caggcaattgatgcgagagactccttagccaagttaatccatgcaagcttgtttgagtgg
ttagtagaaaagatcaacatatcacttgcaaggggcaagcatcacactggaagttcaata
aggattttagatatttatgggtttgaatcatttaagaaaaatagctttgagcagttttgc
atcaactacgctaacgagaggctccaacaacattttatccgacatctctttaaaattgag
caagaggaatatgagtcggaaggaattgactgggaaaaagtagattttgtagataatcaa
gaatgtctcaatctctttgagaagaaacctcttggattagtatctttattggatgaagaa
tcaaattttcctaaagccacaagtttaacttttgctgctaagctgaaacagcacctcagt
gctaattattgttttaaaggagatggggctggagcatttactgtttgccattatgctgga
gaggttctctatgacaccggggagttcctggaaaagaacagagatccattgcattccgaa
atcatacagttattctcactgtgtaacagccaattgcctcaattgtttgcctctaaaatt
atcccatctcagaagcaaagtgtgataacaaaattcaaggaccagctttttaaattaatg
cagcagcttgaaagcacaactccccattttgttcgttgtataaagccaaatagtaagaag
gttcctggtgaattcgagaaagatcttgtatcagagcagcttagatgctgtggcattctt
gaagttgttaggatctcaagatctgggtacccaacccggatgacacatcaagaattcaca
agaaggtatgggatcttacttcctgagaataacatatgccaagatccattaaatacctca
atagccgttctacagaagtttgatatccaacctgaaatgtacgaggttggttatacaaag
ttattcttccgagcaggacagattggtgctctggaagatgttagaggaaaaactctgaga
ggtgctcttgagatacagaaatgcttccgtcgccatctggctcatcggagtattctcaaa
cttaaggggggaagtaccgcgttgcaatcatatatccgtggtgaaatcgtgagaagagag
tatattgctttactaaagctgaagcagcaagttgctgaacaaaagatggatgaggcagtt
ctgcaactacaatctgcaattcgtgcatggatggtacgaagacattttagtaacagtcag
gaattggaagaatccaatgccagtgaagaaccagagatgatgatttctgaaatgcaggat
gttcaaacagaactgccactttctgctattgaactgcaaaagaggttagtgatagcagaa
atgactcttgtaaaaaaggaaagagaaaatgctgtcttgagagagaaattacaacagtat
gaggccaagaggttggaatgtgaatccaagatgaaatccatggaggagatgttgcacaat
cagatggtatcattacaaatgagtttggctgccgcaagaaaaagcatctgtgctgatata
tgtagcactaaatctgaaaaatactttgataacgaatcaccttggttttatgattgcgag
gaggcctcctctcagaatcccagtgctagtgctctcatcaaatattccagcaagggtact
gcagcttctacatgtggggacaagggcggcttagagttagctgctcctcagcttgagccg
aaaaaacataagtttgttgatgaagtccgggctgttatgaagatcaagtcagttagtcta
gctcggatgagtcctagagatgaactgcagaatgtgaaaaacaagctcggagcatggaaa
acagatataaagggtaagttaaaggatgcaaaggcaaaatcacagaagcctgggcatgct
gatggtgaaaaagttcatcgaaaatggaatgatcttgtcccacaacggcgattcagttta
cgttag
DBGET
integrated database retrieval system
