Salvia hispanica (chia): 125205656
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Entry
125205656 CDS
T09851
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis00040
Pentose and glucuronate interconversions
shis01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125205656
Enzymes [BR:
shis01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
125205656
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
KH_GLD-3_3rd
Motif
Other DBs
NCBI-GeneID:
125205656
NCBI-ProteinID:
XP_047960675
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Position
2:complement(30688529..30690281)
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AA seq
438 aa
AA seq
DB search
MMPTNYKKCILIFCILLPMVAQAKIADFDEYLQKKAAESYEESLNSFDPNPEGVTDDFNT
LVGETMIVTYNGTRRNLINEEGCKATNPIDRCWRCDPNWNRNRKRLAQCGAGFGHRTTGG
KKGRYYVVHDPSDDDMVNPKPGTLRHAVTRSEPLWIVFAHSMVIHLKQELIVSSHKTIDG
RGAVVHIADGAGITLQFVRNVIIHNIWIHNIVPANGGTIRDAVDHVGLRTQSDGDAITVF
SSSNIWIDHVSLSRATDGLIDVIEGSTAVTISNCKFNHHNDVMLLGANDQSSKDSIMQVT
VAFNRFGIGLIQRMPRARWGFVHVVNNDYSHWELYAIGGSAHPTIISQGNRFRASNYRYT
KEVTKRDYAPESEWMKWQWRSEGDLFTNGAYFRESGPPLHHTKNPLMKENLIKFRPGSFV
GRLTRTSGALRCRNYHYC
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgatgccgacaaattataaaaaatgtatattaattttctgcatcttgctaccgatggta
gctcaggctaaaatcgccgacttcgacgaatacttgcaaaagaaggctgcagaatcctac
gaggaatccttgaactcattcgatcccaaccctgagggtgtgaccgatgatttcaacacg
cttgttggcgagactatgattgttacatataatggaacaaggagaaatctaatcaatgag
gaggggtgcaaggctactaacccgatcgatcgctgctggcggtgcgacccaaactggaac
aggaacagaaagaggctagcccagtgcggtgccggattcggacaccgcacaaccggaggc
aaaaaggggagatactacgtggtgcacgacccatccgacgacgacatggtgaacccgaaa
ccgggcaccctccgccacgcggtgacacggagcgagccgttgtggatcgtcttcgcccac
agcatggtgatccatctgaagcaagagctcatcgtgagtagccacaagacgatcgacggg
cgtggggcagtggtccacatagcggacggcgcgggcatcacgctccaattcgtccgcaac
gtgatcatccacaacatctggatccacaacatagtccccgccaacggcggcaccatccga
gacgcggtggaccacgtggggctgcggacacagagcgacggcgacgccatcaccgtgttc
agctcgagcaacatatggatcgaccacgtgtcgctctcgcgcgccacggacgggctgatc
gacgtgatcgaggggtcgaccgcggtcaccatctcgaactgcaaattcaaccaccacaac
gacgtgatgctcctcggggcgaatgaccagagctcgaaggactcgatcatgcaagtgacg
gtggcgttcaacagattcgggatcgggctgatccagaggatgcctcgggcgaggtggggg
ttcgtgcacgtggtgaacaacgactactcgcactgggagctgtacgcgatcggggggagc
gcgcacccgaccatcataagccaggggaacaggttcagagcctccaactaccgttacacg
aaagaggtgacgaaaagagactacgcgccagagagcgagtggatgaaatggcagtggagg
tcggagggagatctgtttaccaatggggcctacttcagggagtcggggccgccgttgcac
cacaccaagaacccattgatgaaggagaatttgatcaagttcaggccggggtcgttcgtc
gggaggctcacgcgcacctccggagcgcttagatgccgcaattaccactattgctag
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