Salvia hispanica (chia): 125205757
Help
Entry
125205757 CDS
T09851
Name
(RefSeq) uncharacterized protein LOC125205757
KO
K19022
AP-5 complex subunit beta-1
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shis03400
]
125205757
DNA repair and recombination proteins [BR:
shis03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
125205757
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
Motif
Other DBs
NCBI-GeneID:
125205757
NCBI-ProteinID:
XP_047960819
LinkDB
All DBs
Position
2:16067086..16074854
Genome browser
AA seq
1126 aa
AA seq
DB search
MAGMPPKPLSPPEWDSLIDDYNLDGASRLHRWTGGASVPDLCLSSILRKDFPIQLKLHIL
TFLEHHSLEDSPPPPPFLLRLLDALRSVIQSPSDPFPLKDQFLISTTAVFVTSLSEADEF
GGGAPPLCGLVELLLTIINRPNHSLDRHTRGVACECLRQLELAFPCLLSEIAPHLWSLCQ
SERTHVSQWYVLLLSTAVLNIVKLKPSEASIASISNPTIPLVPFNLPQFLIDRVGADFVW
KENENCYKELRKVVSYLLDCPQYLTSFGVVEFMGAIIPLAEELELQASLLRVQFSWLLYT
FKPLLCHIFLRMYVKFLDSFEGQEFEVASRLLLLSKESHHYLVFRLLALHWMLGLFALTV
GEEEARKRSVIDMSLRFYPTIFDPLAMKALKLDLLAYCSRLLSDVGDANVVKGVEVDKEV
YKVKLFKDGLLSVSSFEWLPPWNTETAVAFRTFHKFLIGGSPHSDSATSSVSTLTESNIF
DALQKRLVDSTSEFKGLVPVVVAFIDRLLGCHKHRWLGEHLLKTLDKHLLPKLKKDYNLG
SYFPIFERISENDNVSPSGLLNLLLRFMVFLVEKHGPDSGLRSWHHGSKILGICRTMLVH
HHGSSLFTGLSHLLVSICLFFPDLEVRDSARFYLRMLIGIPGKKLKHILNTGEHLPGLSP
STHSGSFFSLQSASIFPDLKKSSSIASCIYIERATSLLVKQSWSLSLPNFGTNPGLPGFF
DGIRDNEPVGEEQVLEITMSGDTILENDLPHQQKGPLRVMDAKNSEIVNELRRHFISIPD
YRHMPGLKIQISCNLRFDSEPLVDEEKKFTGANAFDREDQLPALYATVLTFTSSSPYGAI
SPFHIPFLLGSPPKNDKLLSQAESLAIVSVENGHVEEESFKAPVCIEFEPREPMPGLVDV
FIETNADNGQVIKGQLHSISVGIEDMFLRAIVPDDIAEDDVPSYYVNLFNALWEACETTS
STGRETFSLKGGRGIAAISGTRSVKLLEVPVTALVEAIERHLAPFVVCVIGEPLVGMVKS
GGVIKDVIWKDSSSDSSLDITCSPTSARGALYLKYFGDEEEDDGGTQITAARENIGYCHI
LIFLPPRFHLLFQLEVRDFSTLVRIRTDHWPCLAYVDDYLEALFLE
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atggccggaatgccgccgaaacccctctctccgccggaatgggattccctaatcgacgat
tacaatctcgacggcgcctcccgcctccaccgctggaccggcggcgcatccgttccggac
ctctgcctctcctccatcctccgcaaagacttccccatccaactcaagctccacattctc
actttcctcgagcaccactcgctcgaagattcgccccctccgccgcccttcctactccgc
ctcctcgacgccctccgctccgtcatccagtcccccagcgaccccttccccctcaaggac
caattcctcatctccaccacagccgtcttcgtcacatcgctctccgaggccgacgaattc
ggcggcggcgcgccccctctctgcggcctcgtcgagctgctgctgactatcatcaatcgc
cccaaccacagcctcgatcgccacacgcgcggcgtcgcgtgcgagtgcctgcgccaattg
gagcttgctttcccctgcttgctctccgagatcgccccccatttgtggtctctttgccag
agcgagcgcactcacgtttcgcagtggtacgttctgttgctctccactgctgtactcaat
attgtgaagctgaagccgagtgaggctagtattgcatcgattagtaatcctacaatccct
ctggtccccttcaacctacctcagtttttgatagatagagttggggcagatttcgtgtgg
aaggagaacgagaattgctataaagagttgaggaaagtggtttcatatttgcttgattgc
cctcagtatttaacttcatttggtgtggtggagtttatgggggccatcattccattagct
gaagaattggaacttcaggcttctttgttgagagtgcagttctcatggctgctatacaca
ttcaagccattgctttgccacattttcttgcgtatgtacgtgaagtttttggattcattt
gaggggcaagagtttgaagtagcttcaagattgttgttattgtcgaaagaatcccatcat
tatttggtatttaggttgttggctcttcactggatgttgggcttatttgctttgacagtt
ggagaggaagaagcaagaaagagaagcgtaatcgatatgagcttaaggttttatcctaca
atatttgatccactggctatgaaagccttgaagcttgacctgcttgcatattgctctaga
ttgctctctgatgttggagatgcaaatgttgtaaagggtgtggaggtggataaggaggtg
tataaagtcaagctattcaaagacggccttctttcagtatcatctttcgaatggctgccg
ccatggaacacggaaactgcagtggcgtttcgcaccttccataagtttctgataggtgga
tcaccacattctgacagtgctacttcttccgtttctactcttacggagtctaacattttt
gacgccttacagaagagactggtggactcaacttcagaattcaagggattggtgccagta
gttgttgcattcattgataggctcttgggatgccacaaacaccgctggttgggagaacat
ctccttaaaacactggataaacatctgcttccgaaacttaaaaaagactataacctggga
tcttactttcctatatttgagagaatttctgaaaatgacaacgtctcacctagtgggctg
ttaaaccttctgttgagattcatggtttttcttgtagagaaacatggtcctgatagtggg
ttgagatcttggcatcatgggagtaaaattcttggcatttgtagaacaatgctggtccac
catcacggttctagcttgtttactgggttatctcatcttctggtttctatttgtcttttc
tttcctgatctggaggttcgtgatagtgcgagattttacctgagaatgctaattggcata
ccaggaaagaagctcaagcacatcctgaatacaggggaacatttgcctgggttatctcca
tctactcattctggctcattcttcagtcttcaatccgcttcaatttttcctgatcttaag
aagtctagcagtattgcttcttgtatatacattgaacgggcaacgtcattactagtgaag
cagtcatggtccttgtcccttcctaactttggcaccaatcctggtttgcctggttttttt
gacggcatcagggataatgaaccagtaggcgaggaacaggtcttggagataactatgagt
ggtgatactatcttagagaatgatttgcctcatcaacaaaaggggcctttacgggtgatg
gatgcaaaaaattctgagatcgtcaatgaactgagaagacattttatatctattcctgat
tatagacatatgccagggctcaagattcagatctcctgtaatttgagatttgactcagag
ccattggttgatgaagagaagaaatttacaggagctaatgcatttgacagagaggaccaa
cttcctgcgctatatgctacagtgcttacattcacttcctcctcaccatatggagctatt
tccccatttcatattcctttccttcttggctcaccacctaaaaatgataaacttttgagc
caagctgagtcattagctattgtttctgtggagaatggccacgtagaagaagagagcttt
aaagctcctgtgtgtatagagtttgagccacgagaaccaatgcctggcctggttgatgtt
ttcattgaaactaatgcagacaatggtcaggtaatcaaaggacagcttcatagcatttct
gttgggattgaggatatgtttctcagagctattgttccagatgacattgctgaagatgat
gttccgagttactatgtgaatctattcaatgcattatgggaggcctgtgagacaacatcc
agcaccggtagagaaaccttttccctgaaaggaggaagagggattgctgctatcagtggg
acgcgatccgtaaaacttcttgaagttccagtgacagctttggttgaagctattgaacga
cacctggcaccttttgttgtttgtgtcattggtgaaccacttgttggcatggtgaaatca
gggggcgtgatcaaggatgttatatggaaggattccagctcagattcttcattggatata
acttgttcaccaactagtgctcgaggggccctttatctcaagtactttggtgatgaagaa
gaagatgatggagggactcaaattacagctgctagagaaaacataggttactgtcacatt
ttgatatttcttccaccaagattccatctcctatttcagctggaggttcgtgatttttca
actctggtccggattagaactgaccattggccatgcctagcctatgttgacgactatttg
gaagctttatttttggagtga
DBGET
integrated database retrieval system
