Salvia hispanica (chia): 125205854
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Entry
125205854 CDS
T09851
Name
(RefSeq) transcription initiation factor TFIID subunit 12b isoform X1
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
shis
Salvia hispanica (chia)
Pathway
shis03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125205854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shis03021
]
125205854
03036 Chromosome and associated proteins [BR:
shis03036
]
125205854
Transcription machinery [BR:
shis03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
125205854
Coactivators
SAGA/TFTC/STAGA complex
125205854
Chromosome and associated proteins [BR:
shis03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
125205854
STAGA complex
125205854
TFTC complex
125205854
SAGA complex
125205854
SLIK complex
125205854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
125205854
NCBI-ProteinID:
XP_047960969
LinkDB
All DBs
Position
2:complement(38490773..38497168)
Genome browser
AA seq
745 aa
AA seq
DB search
MAENSPSSSSPPKPLPVQQSSAMIEPPSNSQQLQPLQSPSPSLDHQQQQQQLMQSQQQQL
VQSQQQLVQQQQQQPQQQQLQQLQQQIMQQQGNSSSVNGGSGGGNLIGVSNFQGMQRNPS
IARLNQMQQSGSINSQLGMMRQQHQQQQNSSAIYGQMNFGGMSVTQQQQQSSSVGINGGN
SSQQQQQQMGQQGQLQQQIGQQSQLQQQMGQQSQLQQQMGQQSQLQQQMGQNQLQQQLGQ
QNQLQQQLGQQNQLLQQQQQQQQIGQQNQLQQIGQQSQLQQQVGQQSQLQQQLGGQGSMQ
QQQMGQGQLQQSQMGQMAGGNLSRSALMGTGNLPMLSGQAAQFNLQNQYLNSPRQKAGFM
QGSQFHQGNSPGQSLPGMQAMGMMGSINLASQLRPNSTLAYAQQQRMTPSQLRQHLSQQN
ALTTGQKLQGQNIARTSFMNAQIAGLAQNGQPGMMQNAISQQQWLKQMPAISSPNTSSYR
LQQQLLMQQQLASSQLQQQQQLSQIVQQQTQAQSQMHQQKQQQQLQSPMQQPQQPPQQQL
FHQQQSPRIAGPGGQKSVSLTGSQPDATGSGATTPGGSSSHGTEAGNQLLGKRKIQDLVS
QLDFNGKLDPEVEELLLEIADNFIDSVTTFACTLAKHRKSSTLEAKDVLLHLEKNWKLTI
PGYSSEEKKQSTENPPTDAHKKRMDVIRTLTEPAQSETNSGAKQMVRQGSGNQVGQNHMI
RPSPSSEQLVSQSAVPQMLQQNTRF
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaattcgccgtcatcgtcttccccaccgaaacccttgccagtgcagcagagc
tccgccatgattgaacctccttcaaattcgcagcaattacagccgctgcaatcgccatct
ccgtcgctcgaccaccagcagcagcagcagcaattgatgcaatcgcagcagcagcaattg
gtacaatcgcagcagcagttggtacagcagcagcagcagcagccgcagcagcagcaattg
cagcagctgcagcagcagataatgcagcagcagggcaacagcagcagcgtcaatggcggt
agcggcggtggcaatttgataggagtttcgaattttcaaggtatgcaaaggaatccttcg
atagctaggcttaatcagatgcagcagagtggtagtattaatagccagttaggaatgatg
agacagcagcaccaacagcagcagaattcgtcggcaatttacggtcagatgaatttcggt
ggaatgagcgtgacgcagcaacagcagcagagcagtagcgttggtatcaatggaggcaat
agcagccagcagcagcaacagcagatggggcaacaaggccaattgcagcaacaaatcggg
cagcaaagccaattgcagcagcaaatggggcaacagagccaattgcagcagcaaatgggg
caacagagccaattgcaacagcaaatggggcaaaaccagttgcagcagcagttagggcag
caaaatcagttgcagcagcagctggggcagcaaaaccagctgctgcagcagcagcagcag
cagcagcaaattgggcaacagaatcagttgcagcagatcggccagcaaagtcaactgcaa
cagcaagtcgggcaacagagtcagttgcagcagcaactaggaggacagggctcgatgcag
cagcagcaaatggggcaggggcaattgcagcaatcacaaatggggcagatggctggtggg
aatttgtcgaggtccgctctgatggggactgggaatttgcctatgttatctggtcaagca
gcccagtttaatttgcaaaatcagtatttgaattcgccacgtcagaaggcggggttcatg
caagggtctcagttccaccagggtaattctcctgggcagtcattgccaggaatgcaagca
atgggaatgatggggtcaattaatctggcttctcaactaagaccaaatagcacacttgct
tacgcccagcagcagagaatgactccaagccaactaaggcagcatctttctcagcaaaat
gcacttactactggccagaaattgcaggggcagaatattgcaaggacgtcatttatgaac
gcgcaaattgctgggctggctcagaatggacaaccgggtatgatgcagaatgctatatca
caacagcagtggttaaagcaaatgccagcaatatcctcccccaacacttcttcatatcgt
cttcaacaacagctgctcatgcaacaacaactagcttcttcccagttgcagcaacaacag
cagttgtctcaaatagtacagcagcaaacacaggcccagtcacagatgcatcagcagaaa
caacagcaacagctgcagtcgccaatgcagcagccgcagcagcctccacaacagcagctt
ttccatcagcagcagtcaccaagaatcgctggaccgggagggcagaaatcggtgagtttg
actggatcacagcctgatgccactggatcaggagcaactacaccaggtggaagttcaagc
catggcacagaagctggtaatcaacttcttgggaagagaaagatacaagatttagtgtca
cagttggatttcaatgggaaactggaccctgaagttgaagagcttctgttagagattgct
gataactttattgattcggttactacttttgcatgcaccttggcaaagcatcgcaaatct
tcaacgttggaggccaaggatgtcttgctgcatttagagaaaaactggaaactgaccatt
cctgggtattcgagcgaggagaaaaaacaaagtactgaaaatccccctactgatgcccac
aaaaagcgtatggatgtgattcgcaccttgacggaacctgcacaatctgagacaaacagt
ggagctaagcagatggtcaggcagggatcaggaaatcaagttggtcaaaaccatatgata
agaccttctccaagctccgagcagttagtttcgcagtctgctgtgccccaaatgctgcag
cagaacactagattctga
DBGET
integrated database retrieval system
