Salvia hispanica (chia): 125205898
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Entry
125205898 CDS
T09851
Name
(RefSeq) LOW QUALITY PROTEIN: tRNAse Z TRZ4, mitochondrial-like
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shis03016
]
125205898
Enzymes [BR:
shis01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
125205898
Transfer RNA biogenesis [BR:
shis03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
125205898
Prokaryotic type
125205898
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_4
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
125205898
NCBI-ProteinID:
XP_047961078
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All DBs
Position
1:42752006..42756647
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AA seq
785 aa
AA seq
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MKGGSEKGGILAMGFNRKRAEGRDESARPKKLQLNPFNTTAYVQILGNGMDTQDTSPTVL
LFLQHKRFIFNAGEGFERFSTEHKIGFSQVSNIFLSRVCSETAGGLPGFLLTRVGLGVIG
MPVKLWGPSNFEYLIDAMQSFIPKDANVSSHSFGPSPSMVVQNLDNPFVLIDHEEIIISA
VLLRPNYEEPSSPEPIKNVTKPGDLSVIYICDLRKLNGEFDPERAAALGLRPGPKCDSLV
DGNPVMSDSQDIMVHLSDVIMGPSVPGPIVLLVDCPTLLHFRDLLTVQCLAPYYVDSAHD
XXRDSKIVNCVIHLTPLSVARTDDYRTWMSKFGAAEHIMAGHQMNNIQVPILKASTRLAA
RLNYLSPQFFPSLGCWTPPNMDLPSETEASHEISAENLLKFNLLPYENMGLDRSSIPKLT
SHSEIIQELLSEIPEARDASENVTRLLSDCASVTEEPWLLEDAVPSCLEDITREDMEIVL
LGTGSSQPSKYRNVSSIFINLFSKGSILLDCGDGSLGQLKRRFGVQGADEAIKGLKCIWI
SNFNADHHTGLASILARRRDLLKGSPHEPALVVGPYQLNWFLSAYQKVEDLDMRFLDCSH
TTEDALEAFDSNKGNPSKGVDSSLCKILGELGLEALVSFSVNHCPGAHGVVLQAASRINS
AGKTIPGWKVVYSGVTRPCPKLVWAARHATVLIHEATCEDGMMYDAVARKHSTTTEAVEL
GNYAGAYRIILTHFNQRYPKIPEFDEAGHMHKTCVAFDMMSVNLADVHALPRVLPYLKVL
FRGEM
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgaagggtggaagtgaaaaaggcggaatcttggcgatgggctttaataggaagagggct
gaaggaagggatgagagcgctaggccgaaaaagctgcagctcaatccttttaataccact
gcttatgtgcagatccttggaaacggaatggatacacaagacacatccccaacagtcctg
ctgtttcttcaacataaaagatttatatttaatgctggagaaggatttgaacgcttcagc
actgagcataagatcggattctcgcaggtgagtaacatatttctctcacgtgtctgctca
gaaacagctggtggacttccaggtttcttattgacccgggtgggcttgggagtcattgga
atgcctgtcaagttgtggggcccctccaactttgaatatttgattgatgctatgcaatcg
ttcatccccaaggatgccaatgttagttcgcatagctttgggccatcaccgagtatggtg
gtgcagaacttggataatccttttgttctgatcgaccacgaagagatcataatatccgca
gtactcttgagaccgaattatgaagaaccaagttctcctgagcctattaaaaatgtgacg
aagccgggtgatctctctgttatttatatttgtgacttgcgaaagcttaatggagaattt
gaccctgaaagggccgctgctctcggattaagacccggcccaaaatgcgactcgctggta
gatgggaatcctgtaatgtcagatagtcaagatattatggtacacctaagtgacgtaata
atgggtccgtctgttcctggtcctattgtccttttggtcgactgcccaacattgttgcat
ttccgggatctgctgaccgtgcaatgcctcgctccgtattatgtagattcagcgcacgat
taatagagggattccaagattgtgaattgcgtaattcatctgactcctctgagcgtcgct
cggacagatgattatcgaacgtggatgtcaaaattcggagcagctgagcatataatggca
ggacatcaaatgaacaatatacaggtgccgattttgaaagctagtactaggctcgcagct
cgtcttaactatttgagccctcagtttttcccgtctttgggttgctggacaccgccgaac
atggatttaccatctgagactgaggcatcacatgagatttcggctgagaatcttctcaag
tttaatctgcttccctacgagaatatggggctcgacagatcaagtataccgaaactaaca
tctcactccgagatcattcaagagctattgtcagaaattccggaggctagagacgcctcc
gagaatgtgacccgtttattgtcggattgtgcgagtgtgaccgaggaaccatggttgctc
gaagatgctgtccctagctgtctcgaagatataaccagagaagacatggagattgttctt
cttggtaccggttcttcgcaaccctcaaagtatcgaaacgttagttcgattttcatcaat
ttattttccaaaggaagcatactcttagattgtggtgatggaagcttgggacagctaaag
agaagattcggagtccaaggtgcggacgaagctataaaaggtttgaaatgcatctggatt
tcgaacttcaacgcagatcaccacacgggccttgcaagtatccttgctcgacgacgtgat
ctgttgaagggatcaccacatgagcccgccctcgtcgttggcccgtatcagctcaattgg
tttctgagcgcctaccagaaggtcgaggatctggacatgcggtttctcgactgctctcat
acaactgaagatgcattggaggcttttgattcgaacaaagggaacccgagcaagggcgtc
gattcatctctgtgcaagattctcggagaacttggattagaagcgctggtgagcttctcc
gtcaatcattgtcctggagctcatggcgtcgtgctgcaggctgcgagcaggatcaacagc
gccggtaaaaccattcccggctggaaagtcgtctactcaggcgtcaccagaccctgcccg
aaacttgtttgggctgcccgccacgcgaccgtgctcattcacgaggcgacctgcgaagac
gggatgatgtacgatgcggtggctcggaaacacagcacgacgacagaggcagtggaattg
gggaattatgcgggtgcgtataggatcatactgactcatttcaaccagagatacccgaag
atcccggagttcgatgaagcagggcatatgcacaaaacgtgcgtcgcgttcgacatgatg
agtgtcaacttagcggatgttcatgcactgccaagagtgctgccatatctcaaagttctg
tttagaggtgaaatgtaa
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