Salvia hispanica (chia): 125205920
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Entry
125205920 CDS
T09851
Name
(RefSeq) YTH domain-containing protein ECT3-like isoform X1
KO
K20102
YTH domain-containing family protein
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125205920
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125205920
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Gene cluster
GFIT
Motif
Pfam:
YTH
DUF3942
Motif
Other DBs
NCBI-GeneID:
125205920
NCBI-ProteinID:
XP_047961086
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Position
2:9708046..9713835
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AA seq
558 aa
AA seq
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MAGEKKTETYQLNAPVAKSESSINIPDKDMVKDGFPSEPVSSVSAGGNVVPGKSATDQSV
SSEQGPYYPPTSCYDYYYPGYNGNFTQPDDKGFPNTPGGSYAGIQQDNASLLYYVPGYGP
YSTGFVGVDGKQAYTSSEYPCSYGSEVFPCYTYDSTYAGNGSSSNKSGSVKSAGTSGSGR
SNGFNVAKTHSNLSSKSSALPYNYKTQQPNSSSSVYQNQSLHPLNKFGAGFQSSGLMRGI
QPSGNFSSFTSRNPRPFPQYGQVNYQSNAGLWNNNYRSRSRENFGRSGEVKAASELTRGP
RADSKNSSKSPADVEQLGFAIDRDKYNLQEFEAVYDSAKFFVIKSYSEDDIHKCIKYDVW
SSTPNGNKKLDAAFREADAKTTEAGKKCPVFLFFSVNGSGQFVGVAEMIGHVDFSKNMDF
WQLDKWNGFFPLKWHIIKDVPNTQLRHIILENNDNKAVTYSRDTQEVELKQGLEILSIFK
NYSAKTCVLDDFNFYENREKALKAKRSGVPVSQTNGFRNNDYEKHSGESAKNNQSDTPSL
VSLTENLSLETQPLQSSI
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggccggagaaaagaaaacagaaacatatcagctaaacgctcctgttgcgaagtctgaa
tcgtcaatcaatattcctgataaagatatggtgaaagatggatttccatccgagcctgtg
tcgtctgtatctgctgggggcaatgttgtgcctggaaaaagtgcaactgatcaatctgta
agttcggagcagggtccctattatccacctaccagctgttatgattattattatccggga
tacaatgggaactttacccagcctgatgacaaaggttttcctaacactccaggtggttct
tatgcgggaattcaacaggataatgcttcactcctatattacgttcctggctatggtcca
tattcaactggttttgtgggtgttgatggaaaacaagcatacacatcatctgaatatccc
tgctcatatgggtcagaggtgtttccatgctatacatatgattcgacctatgctgggaat
ggttcgtccagcaataaaagtggctctgtaaaatctgcaggcactagtggctctgggagg
tcaaatggctttaatgttgccaaaactcatagcaacctctcaagcaaatcttcagcttta
ccttataattacaaaacacaacagccaaattcttcgagttctgtctatcagaatcagtct
cttcatccattgaacaagtttggtgctggtttccagtcatctggcctcatgagaggaatt
cagccttctggaaacttctcttcatttactagccggaatcctcgtccttttccgcaatat
ggtcaggtgaattaccagtcgaatgctggtttatggaacaacaactacagatccaggtca
agagaaaattttggcagaagtggagaagtcaaagctgcgagtgaactaactcgtggccct
agggctgacagtaagaattcctctaagtcgccagctgatgtcgaacaattgggtttcgca
attgatagagataaatacaacttacaagagtttgaggcagtgtatgatagtgcaaagttc
tttgtgatcaagtcatatagcgaagatgatattcacaaatgcatcaaatatgatgtctgg
tcaagtactccaaatggcaataagaagttagatgctgctttccgtgaagctgatgctaaa
acgacagaggcaggcaaaaaatgtccagtgttcctatttttttcggtgaatggaagtggg
cagtttgtcggtgttgctgagatgattggccatgttgattttagcaaaaatatggacttt
tggcagctcgacaaatggaatggcttcttcccattgaagtggcacatcataaaagatgtc
cccaacactcaattgcgacacattatccttgaaaacaatgataataaggccgttacttat
agcagggacactcaagaggttgaactgaaacagggcctagaaattctaagcatatttaag
aattactctgctaaaacttgcgtgctcgatgacttcaacttttatgaaaatcgtgaaaag
gcgctgaaagcaaagaggagtggtgtacctgtttctcaaaccaatggctttagaaacaat
gattatgagaagcactctggagagtctgccaagaacaatcagtcagatactccatcactt
gtttcgctgactgaaaacctttcgctcgagactcaacctctgcagagtagtatatga
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