Salvia hispanica (chia): 125206009
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Entry
125206009 CDS
T09851
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
shis
Salvia hispanica (chia)
Pathway
shis04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
125206009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shis04121
]
125206009
Ubiquitin system [BR:
shis04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
125206009
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Gene cluster
GFIT
Motif
Pfam:
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
125206009
NCBI-ProteinID:
XP_047961222
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Position
2:complement(13950887..13952585)
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AA seq
311 aa
AA seq
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MYSACARITSLDLIYAAIQSPDLVKIISLCPHLQCLWVLDYIEDAGLEALAASCKDLQEL
RVFPSDPFEAEANVALTEQGLVSVSEGCPKLQSVLYFCRQMSNAALITIARNRPEMVRFR
LCIIEPQAPDYLTLEPLDTGFGAIVENCKELRRLSMSGLLTDRVFEYIGKHAKKLEMLSI
AFAGDSDMGLHHVLSGCDSLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCLVSYGAC
KLLAQKMPRLNVEVIDERGHPNSRPENCPVEKLYIYRTVAGRRVDMPDFIWTMDKNAGSP
EVFVSNGAVEL
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgtattcagcctgtgccagaatcacttctctggacttgatttatgcagcgattcaaagt
cctgatcttgtaaaaattattagcctatgtccgcatttacagtgtctctgggttctggat
tacattgaagatgctggtctggaagccctggctgcatcttgcaaggatttgcaagaactt
cgggtgttcccttctgatccttttgaggcagaagctaacgttgctttgacagaacagggg
cttgtctccgtttcagaaggctgccccaagctccagtctgttctatacttttgtcgtcaa
atgtcaaatgctgccttgattacaattgcaaggaaccggccagagatggtccgctttcga
ctttgtatcattgagcctcaagctcctgactacctgactctcgaaccacttgatactggt
tttggagccatagtagagaactgcaaggaattacgacgcctttccatgtccggcctcctt
actgatcgagtttttgaatatattggaaagcatgctaagaaattggagatgctgtccata
gcttttgccggggatagtgacatgggcctccatcatgttttgtctggatgtgatagcctg
cggaaactggagatcagggactgtccatttggggacaaagctctcttagcaaatgctgca
aagctagagacaatgcgatccctttggatgtcatcatgcttggtgagctatggagcgtgt
aagctgcttgctcaaaagatgcccaggctcaatgttgaagttatagatgagagaggtcac
cctaattcccggccagaaaattgccctgttgagaaactctacatctaccggacagttgca
ggacggagagtcgacatgcctgatttcatctggacgatggacaaaaacgcaggaagccca
gaggtgtttgtgagcaatggtgctgttgagctataa
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