Salvia hispanica (chia): 125206012
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Entry
125206012 CDS
T09851
Name
(RefSeq) probable pectate lyase 9
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis00040
Pentose and glucuronate interconversions
shis01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125206012
Enzymes [BR:
shis01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
125206012
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
125206012
NCBI-ProteinID:
XP_047961226
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Position
2:complement(37683263..37684868)
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AA seq
384 aa
AA seq
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MPSRAMQGITLCLIRAISIAILLSSGRVEARRNIDDMNVIDKCWRTNPDWRRNRQQLATC
AVGFAGQMFNNIGDDVINYKVTDPSDDPLSPRPGTLRHAMTSITGKIWITFKRHMNITLS
KPLLVSSLTTIDARGANVHIANGGCLLIKQANNVIIHGLYIHDCKPQEPGPVKGPGGEIM
HLGPTDGDAIRIVSSSRIWIDHNTMYDSVDGLIDVTRGSTDITISNNWFRFQDKVMLLGH
DDGFRRDQNMRVTVAFNHFGPNCVQRMPRIRFGYAHVVNNLYLGWGIYAIGGSMNPSIKS
QANLFIAPKGGNKEITWDSGLTGNFKSIEDVFENGASFTTTVDAGATMRPNYAPDQMFEV
EDGLRVRDLTKSAGVLKCPKIARC
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgccctcaagggccatgcaaggtatcaccttgtgtttgatccgggctatctcaatagcc
atcctattgagttcaggccgggtcgaggcccgaagaaatatcgatgacatgaacgtcatc
gacaagtgctggagaacgaacccggactggcgaagaaaccgccaacaactagctacgtgt
gccgttggattcgccggtcaaatgttcaacaacatcggagacgacgtgatcaactacaaa
gtaacggaccctagcgacgaccccttgagcccgaggcccggtacgttgaggcatgccatg
acgagcatcacaggcaagatttggatcacattcaagaggcacatgaacatcacactttcc
aaacccctccttgttagtagcttgacaacaattgatgcaagaggtgccaatgtccacatt
gcaaatggtggatgcctacttattaaacaggccaataatgtgattatccatggcctctac
atccatgattgcaagccgcaagagcccggcccggtgaagggcccgggaggggagatcatg
catttgggcccaacagacggggacgcgatcaggattgtgtcatcttcgaggatatggatc
gatcataacacaatgtacgacagtgtggatgggttgattgatgtcacaagaggatcaaca
gacatcacgatatcgaacaactggtttaggtttcaagataaagtgatgcttctcgggcac
gatgacggctttaggagggatcaaaacatgagggtcacagttgccttcaaccatttcggc
ccgaactgcgtgcaaagaatgccaaggattcgatttggatatgcacatgttgtcaacaac
ctttacctaggatgggggatatatgcaattggagggagcatgaaccctagcatcaagagc
caagcaaacctcttcattgctccaaagggaggcaacaaggagataacatgggatagtggt
ctcaccggcaacttcaaatctatcgaggatgtgttcgagaatggagcctcgttcacgacg
acggtcgatgcaggtgccacaatgaggccaaactatgcaccagatcaaatgtttgaagtt
gaagatgggttgagagtgagggacttgacaaaatctgctggtgttttgaagtgtcctaaa
atagctagatgctaa
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