Salvia hispanica (chia): 125206233
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Entry
125206233 CDS
T09851
Name
(RefSeq) autophagy-related protein 18a-like
KO
K22991
WD repeat-containing protein 45
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shis04131
]
125206233
Membrane trafficking [BR:
shis04131
]
Autophagy
Other autophagy associated proteins
Others
125206233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
BCAS3_WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_Vps41
ANAPC4_WD40
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_HPS5
Beta-prop_IFT80_2nd
Beta-prop_WDR19_1st
Beta-prop_NWD2_C
Beta-prop_WDR35_TULP_N
Lactonase
Beta-prop_WDR11_2nd
Beta-prop_TEP1_2nd
Beta-prop_IFT122_1st
PD40
Motif
Other DBs
NCBI-GeneID:
125206233
NCBI-ProteinID:
XP_047961472
LinkDB
All DBs
Position
2:complement(9322435..9324199)
Genome browser
AA seq
346 aa
AA seq
DB search
MSDPVKPASVLSVSFNQDASCFAVGTTDGFLVFRAADPFGEALRRNFPGGIGVVQMLYRC
NIFAIIGASKSDRNKVRIWDDRLNRGIGELVFRSEVRAVRLRKDRIVVVMLHKIYVYSLS
DFELIHQIETMENRQGLCEICKAGQMVLVCLGEQRGFVRVVQYATNKSTHVMAHSSSIAC
VALMDDGMLMATASTKGTLIRVFRTMDGSLLKELRRGSDRAVVRSISFSPSGRWLVVSSD
KGTVHVFIVKFDSSSLKTCRSEVPETNKFAPLSLSRLSFIKGFLPKYFSSEWSMAQFRIP
EGIQHIAAFGPGENTIAVVGSNGSYYRCQFDPMVGGDMTKLESYNF
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatcctgtgaaaccggcgtccgtgctaagcgtctccttcaatcaggacgccagc
tgcttcgccgtcggaacaaccgacggattcctcgtcttccgagccgccgatcctttcggc
gaagccctccgccgcaacttccccggcggaatcggcgtcgttcagatgctctaccgctgc
aacatcttcgcgataatcggcgcctccaaatctgaccgcaacaaggtcaggatttgggac
gatcgcctcaaccgcggcatcggcgagctggtgttccggtcggaggtgagggccgtccgc
ctccggaaggatcgaatcgtggtggtgatgctgcataagatctacgtttacagtttatct
gatttcgaattgattcatcagattgagacgatggagaatcggcaggggctgtgcgagatc
tgtaaagcggggcagatggtgctggtttgtttgggggaacagagagggtttgtgagggtg
gtgcaatacgcaacgaataagtctacgcacgtgatggcgcacagttccagcattgcttgt
gttgctttgatggatgatggtatgctcatggcaaccgcaagcactaagggcacgctcata
cgtgtgtttagaaccatggatggatccttgcttaaggagctgagaaggggttctgataga
gcagtagtacgcagcatttcattctctcctagtggaagatggttggttgtttcaagtgat
aagggaactgtccatgtattcatcgtaaagtttgattcgagctctttgaagacttgtcgt
tcagaagtaccagaaacaaataagtttgctccactttccctatcgcgtctttccttcatt
aaaggttttctgcctaagtatttcagctcggaatggtcaatggctcagtttcgcatacca
gaagggatacagcatattgctgcgttcggacccggggagaacacaattgctgttgttggc
agtaatggaagttattataggtgccaattcgatccaatggtgggtggagacatgaccaaa
ctggaatcctataacttctaa
DBGET
integrated database retrieval system
