Salvia hispanica (chia): 125206470
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Entry
125206470 CDS
T09851
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis00040
Pentose and glucuronate interconversions
shis01100
Metabolic pathways
Module
shis_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125206470
Enzymes [BR:
shis01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
125206470
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Motif
Pfam:
Glyco_hydro_28
End_N_terminal
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
125206470
NCBI-ProteinID:
XP_047961677
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Position
2:21550044..21552330
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AA seq
417 aa
AA seq
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MVVVNARLSEEVDSVTTYNVLKFGAVGDGKANDTKAFVSAWEAACNKTRENAKISVGSGK
TYLVSEIQFQGPCSSTSITFEVTHPFAITTQIHLIKKSHNWKYFIFSSTQILGNIVAPPR
SAWQKKGSNEWLYFHRVDGLTVVGERQGVIDGRGETWWKNGDSISRPTAMRFSHCNRLEV
RGLKHVNSQMNHVSINGCKNVTVSDLVMIAPSESPNTDGIDISNSIGLRIVNSSMETGDD
CIAINGGTSQVNISNIFCGPGHGISIGSLGKDGKREEVEAINIRNCTFNRTNNGVRIKTW
QGGSGFARNINFSQIIFIEAKNPVIINQNYCPHKICTEKTSAVNVSDVGYYGLRGTSISK
NDATITFNCSKTVHCTNINVDDVDIKSAGSNQTTRSFCSNAHGKARGLMPALGCLLK
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggttgttgtaaacgctcgattaagtgaagaagttgatagtgtgacgacctacaacgtc
ttaaaatttggagcagttggtgatggaaaagcaaatgatacaaaagcatttgtgtcagca
tgggaagcagcttgcaataaaacaagagaaaatgcaaagatatcagtaggcagtgggaag
acatatttggtttctgaaatccaatttcaagggccatgctcttccacctcaatcacattt
gaggtaacacatccctttgcaataactacacaaatccatttaatcaaaaaatcacacaat
tggaaatatttcattttttcttcaacacagatactaggaaacattgtggctccaccaaga
tcagcatggcagaagaaaggctcgaacgaatggctctattttcacagagtcgacgggctc
actgtggtaggggagcgccaaggagtgatcgatggccgtggagagacgtggtggaagaat
ggcgattcgatatcacgaccgactgcgatgcggttttctcactgcaacagacttgaagtc
agggggttgaaacatgtaaacagccagatgaaccatgtttctataaacggatgcaaaaac
gtaacagtttcagacctagtcatgatcgccccttcggagagccctaacacggatggaatt
gacatcagtaattcaatcggtcttcgcattgttaactcttccatggaaactggggatgac
tgcatagccattaatggtggtacttcacaagtcaacatatccaacatattctgtggccct
ggacatggaataagtatcgggagtttagggaaggatgggaagcgcgaagaagtagaagca
ataaacatacgcaattgcacttttaacagaactaacaatggagtgaggatcaaaacatgg
cagggaggatctggattcgccaggaacatcaatttctcccagataatctttatagaggct
aaaaaccccgttatcatcaaccagaattactgccctcacaagatatgcactgaaaaaaca
tcagcagtcaatgtgagtgatgtgggatattatggacttcgtggcacatccatcagcaag
aatgatgctacgattaccttcaactgcagcaagacggtacattgcactaacatcaatgtg
gacgatgtggacataaaatcggcaggttctaatcaaacaacaaggtccttctgctccaat
gctcatggaaaagctcgtggattgatgccggcattgggttgcctactcaagtga
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