Salvia hispanica (chia): 125206490
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Entry
125206490 CDS
T09851
Name
(RefSeq) oligouridylate-binding protein 1B-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125206490
03041 Spliceosome [BR:
shis03041
]
125206490
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
125206490
Spliceosome [BR:
shis03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
125206490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_7
RRM_5
Motif
Other DBs
NCBI-GeneID:
125206490
NCBI-ProteinID:
XP_047961698
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All DBs
Position
2:complement(3785806..3790980)
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AA seq
422 aa
AA seq
DB search
MLNQRFKQQQHQALMQQALLQQQSLYHPGLLAAPQIEPIPSGNLPPGFDPTTCRSVYVGN
IHIQVTEPLLQEVFASTGPVESCKLVRKEKSSYGFIHYFDRRCASLAIMTLNGRHLFGQP
IKVNWAYASGQREDTSSHYNIFVGDLSSEVTDAMLYACFSVYSSCSDARVMWDQKTGRSR
GFGFVSFRNQQEAQSAINDLTGKWLGSRQIRCNWATKGAGTTDEKQNSDAKSVVELTNGS
SEEVKEAASTDAPENNPQYTTVYVGNLAPEVSQVDLHRHFHALGVGSIEEVRVQRDKGFG
FVRYSTHAEASVAIQLGNAQSYLCGKQIKCSWGNKPTPPGTSSNPLLPPVPAPLHGLSAA
DLLAYERQMAMSKMGGVPALMPHQGQHALKPAAMGMGAGASQAIYDGGYQNIAAAQQLMY
YQ
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatcagagatttaagcaacagcagcatcaggcgttgatgcagcaagcgcttctt
cagcagcagtcgctctaccatccaggcctcttagctgctccgcagattgagccaattcct
agtggaaatctgcctcccgggtttgatccaaccacatgccgcagtgtgtatgttgggaac
attcatatacaggtgacagaaccacttcttcaagaagtttttgcaagtactggtccggtt
gagagctgcaagctcgttagaaaagaaaagtcatcctatgggttcattcattactttgat
cgcagatgtgcttcacttgcaataatgactcttaatggaaggcacttgtttgggcagcct
atcaaagttaactgggcatatgctagtggtcagagggaagacacatcaagccactacaac
atttttgttggtgatctcagctctgaggttactgatgccatgttgtatgcatgcttttct
gtttattctagttgttctgatgcaagggttatgtgggaccaaaagactggccgttctagg
gggtttggatttgtctccttccgcaaccagcaggaagctcaaagcgcgataaatgattta
actggaaaatggctcggtagcaggcagatacgctgtaactgggccacaaagggtgctggt
accactgatgaaaagcagaattcggatgctaaaagtgttgtggaactaacaaacggctct
tctgaggaggttaaggaggcagcaagcactgatgcccccgagaataaccctcaatacacc
actgtgtatgtcggtaatcttgctccagaagtaagccaggttgacctccaccgccacttc
catgcacttggtgtgggatcaattgaagaagttagggtgcaacgtgataaaggatttggc
tttgtgaggtacagcacccatgcagaggcttctgtcgccattcaattgggaaatgctcag
tcatatctttgtggcaaacaaattaagtgttcatggggtaacaaaccaacaccgcctgga
actagctcaaacccactccttccacctgtacctgcaccgctgcacggcttatctgctgca
gacctgttagcatatgagcggcaaatggccatgagcaagatgggtggtgtccctgccctc
atgcctcatcagggtcagcacgctctaaagccagcagcgatgggaatgggtgcaggcgct
agtcaggccatctacgatggtggctatcagaacatagctgccgcccagcagcttatgtac
taccagtga
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