Salvia hispanica (chia): 125206882
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Entry
125206882 CDS
T09851
Name
(RefSeq) polygalacturonase At1g48100-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis00040
Pentose and glucuronate interconversions
shis01100
Metabolic pathways
Module
shis_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125206882
Enzymes [BR:
shis01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
125206882
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
End_N_terminal
NosD
Motif
Other DBs
NCBI-GeneID:
125206882
NCBI-ProteinID:
XP_047962054
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Position
2:35665765..35668535
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AA seq
465 aa
AA seq
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MRHLTFLILILLLSENSIYIDAKSHKHRKQGKGGSKASPPPLASKDNGSEGEVLDGNYTS
SVTKSSTFSVLSYGAKGDGVADDTNAFEEAWADACKVQGSTVLIPSGSVFLVKLVAFSGP
NCQSNIVFQLDGKIIAPTNSGAWGKGLLQWLDFSKLKGIAIRGQGVIDGRGSVWWNDKTT
AYQTQDDDSDLLEGEDKGGMPSTKPTALRFYGSTDVTVTGITIQNSPQTHLKFDNCIGVQ
VFGISISSPGNSPNTDGIHLQNSQDVVIHTTNLACGDDCISIQTGCNGVYVHNVNCGPGH
GISIGGLGKDGTKACVSNITVRDSTIKNTMNGVRIKTWQGGSGSVQGVMFSNIQVSEVEN
PILIDQYYCDGHKCGNKTSNVAISSVTYRSIKGSYVTNPIRFACSESTPCSGITVSTVDL
HPSSNAKNDDPFCWEAFGEIQTATTPTITCLRRATQRPTNNAVSC
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaggcatcttacctttctcattctcatcttgcttttgtcagaaaactcgatctacatt
gatgccaaaagtcacaagcatagaaagcaaggaaaaggcggtagcaaagccagtccgccc
ccgctcgcctccaaggataatgggagcgagggagaggtgttggatggtaactacacttct
agcgttacaaaatccagcaccttcagtgtactaagttacggcgcgaaaggtgacggcgtt
gctgatgacacaaatgcattcgaagaagcgtgggccgacgcatgcaaggtacaaggatca
acagtcctgattccttcaggatccgtgtttctcgtaaagctcgttgctttttcagggcca
aattgtcagtctaacatcgtgttccagttagatggaaaaataatcgcaccaacaaactca
ggagcatgggggaagggtttgttacagtggctggatttctccaagttgaaaggaatagcg
atcagaggtcaaggtgtaatcgacggtcgaggatcggtctggtggaacgataaaacgacg
gcatatcaaactcaagatgatgattcagacctgttagaaggcgaggacaaaggaggaatg
cctagcaccaaaccaacggcgcttagattttacggaagcacagacgtaacagttacaggc
ataacgatccaaaacagtccacagacacatttgaaattcgataactgcattggggttcaa
gtatttggcattagcatttcgtcccctggcaatagcccaaatactgatgggattcatctc
caaaactcccaagatgtggttattcacacaaccaatcttgcttgtggagatgattgcatt
tcaatacaaacaggatgcaatggtgtatacgtacacaatgtgaactgtgggccaggtcac
ggcataagcataggaggattgggcaaagatgggactaaagcttgtgtttcgaatatcacg
gttcgcgattccacaattaagaacaccatgaatggcgtcagaatcaagacttggcagggt
ggatcggggtcagtgcaaggagtaatgttttcgaatatacaagtgtccgaagtggagaat
ccaatccttatagaccaatactattgtgacggacacaaatgtggaaacaagacttcaaac
gtggctatttctagcgtaacgtatcgatctataaagggaagctatgttactaatcctatt
agattcgcatgcagcgagtcgactccgtgctcagggataactgtatcgactgtagacctt
catccgtcgtccaatgccaagaatgacgatcccttttgctgggaggcttttggagaaatc
caaacagctactactcccactattacttgtttgcgacgggcgactcaacgacccactaat
aatgccgtttcttgttaa
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