Salvia hispanica (chia): 125206884
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Entry
125206884 CDS
T09851
Name
(RefSeq) polygalacturonase At1g48100-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis00040
Pentose and glucuronate interconversions
shis01100
Metabolic pathways
Module
shis_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125206884
Enzymes [BR:
shis01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
125206884
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Motif
Pfam:
CaM_binding
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
End_N_terminal
NosD
Motif
Other DBs
NCBI-GeneID:
125206884
NCBI-ProteinID:
XP_047962057
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Position
2:complement(35701455..35703437)
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AA seq
335 aa
AA seq
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MRYLTFLILILLLSENSIYIDAKSHKHRKQGKGGSKASPPPVASKDHGSEGEVLDGNDTS
SVTKSSTFSVLSYGAKGDGVADDTNAFEEAWADACKVQGSTVLIPSGSVFLVKLVAFSGP
NCQSNIVFQLDGKIIAPTNSGAWGKGLLQWLDFSKLKGIAIRGQDDDSDLVINRMPSTKP
TALRFYGSTDVTVTGITIQNSPQTHLKFDNCIGVQVFGISISSPGNSPNTDGIHLQNSQD
VVIHTTNLAHKININKLIILIQFDTASTGVLPQKVVLKHQDVQRKKDAQGLLNNVIEETA
SKLVVSRKSKVKALVGAFETVISLQESKPSTQVVS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaggtatcttacctttctcattctcatcttgcttttgtcagaaaactcgatctacatt
gatgccaaaagccacaagcatcgaaagcaaggaaaaggcggtagcaaagccagtcctccc
ccggtcgcctccaaggatcatgggagcgagggagaggtgttggatggtaacgacacttct
agcgttacaaaatccagcaccttcagtgtactaagttacggcgcgaaaggtgacggcgtt
gctgatgacacaaatgcattcgaagaagcgtgggccgacgcatgcaaggtacaaggatca
acagtcctgattccttcaggatccgtgtttctcgtaaagctcgttgctttttcagggcca
aattgtcagtctaacatcgtgttccagttagatggaaaaataatcgcaccaacaaactcg
ggagcatgggggaaggggttgttacaatggctggatttctccaagttgaaaggaatagcg
atcagaggtcaagatgatgattcggacctggtaattaatagaatgcctagcaccaaacca
acggcgcttagattttacggaagcacagacgtaacagttacaggaataacgatccaaaat
agtccccagacacatttgaaattcgataactgcattggggttcaagtatttggcattagc
atttcgtcccctggcaatagcccaaatactgatgggattcatctccaaaactcccaagat
gtggttattcacacaaccaatcttgcacacaaaataaacataaataaacttattatctta
atacaatttgacacggctagtacaggggttttgcctcaaaaggttgttttaaagcatcaa
gatgtgcaacggaagaaagatgctcaaggtttgttgaacaatgtcattgaggagacggca
agtaaactcgtcgtgagtaggaaaagtaaggttaaagccctggtgggagcttttgaaacc
gtgatctctctacaagaaagtaaaccttccacacaagttgtgagttaa
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