KEGG   Salvia hispanica (chia): 125207065
Entry
125207065         CDS       T09851                                 
Name
(RefSeq) uncharacterized protein LOC125207065
  KO
K03504  DNA polymerase delta subunit 3
Organism
shis  Salvia hispanica (chia)
Pathway
shis03030  DNA replication
shis03410  Base excision repair
shis03420  Nucleotide excision repair
shis03430  Mismatch repair
shis03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:shis00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    125207065
   03410 Base excision repair
    125207065
   03420 Nucleotide excision repair
    125207065
   03430 Mismatch repair
    125207065
   03440 Homologous recombination
    125207065
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:shis01009]
    125207065
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:shis03032]
    125207065
   03400 DNA repair and recombination proteins [BR:shis03400]
    125207065
Protein phosphatases and associated proteins [BR:shis01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     125207065
DNA replication proteins [BR:shis03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    125207065
DNA repair and recombination proteins [BR:shis03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      125207065
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     125207065
SSDB
Motif
Pfam: CDC27
Other DBs
NCBI-GeneID: 125207065
NCBI-ProteinID: XP_047962225
LinkDB
Position
2:39852093..39854377
AA seq 365 aa
MAETAALGIIDEIHAFVSDRLQVISYKWLSRNFLVSSNAAKRLLEEFVEKHGDGLAVIYS
LSGWLKSNPTTYHIRLVPSHMLSDAKEEFDGKCSVQVYSIQACLPKDPATLWNHEFVQAE
DLFKQPATLDNCLRDNRFCGVSNSFVKRTVGGTPLGTGSIQMKSTRVSGLSSSSIPQATA
DPRSIQKNSQNAGLNPGAQPPNTAKPVKTEGNVKPDLAQVAEKEKVPRPLPNNKKGQNNK
NSSGSGGSLASMWGRASAKPKPDACLVQAEKAKQGSSVSAEAQICARESAEHEISDDDDD
DKAFSARRTSNGEGSRKRRAVPPAVRKSPAVGNAAPANQAGKAGNKKAAIKDPKQGNLFS
FFKKA
NT seq 1098 nt   +upstreamnt  +downstreamnt
atggccgaaaccgctgctcttggaattatagatgagatccatgccttcgtctccgatagg
cttcaagtgatttcctacaaatggctgagtcgaaattttttggtttcctccaatgctgca
aagagactgctagaggaattcgttgaaaagcatggggatggattagcagtgatttactct
ttatctggctggctgaagagtaaccctacgacctaccatataaggcttgtccccagtcat
atgctttcagatgctaaggaagagttcgatggaaaatgctctgttcaagtttacagtata
caggcctgcctccctaaggatccagcaacgctttggaatcatgagttcgttcaggctgaa
gatctttttaagcagccagcaactcttgataattgtttacgagataacaggttttgtgga
gtttcaaattcatttgttaagagaacagtaggaggaacacctttgggcactggaagcatt
cagatgaaatcaactagagtctcaggtctgtcgagcagttctattcctcaagctacagct
gatccacggtctattcagaaaaattctcagaatgctggtttaaatccaggggctcagccc
cctaacactgcaaaacctgtgaaaactgaaggaaacgtaaagccagatctagcacaggta
gcagaaaaagaaaaagttcctcggccactccctaacaacaaaaaaggccaaaataataaa
aactcttctggaagtggaggttcattagctagcatgtggggtcgtgcatcagcaaagcct
aaacctgatgcttgcttggtccaagctgagaaagccaaacaaggatcttctgtcagtgcg
gaagctcaaatttgtgctcgtgaatcagcagagcatgaaattagtgatgatgatgacgac
gacaaagctttcagcgcaaggaggacctctaatggtgaaggcagtagaaagagaagagct
gtgcccccggctgttcgtaagtcgccagcagtggggaacgctgctccagctaaccaagcc
gggaaagccggaaacaagaaggcagcaattaaggatcctaagcaagggaatctcttctca
tttttcaaaaaggcttga

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