Salvia hispanica (chia): 125207124
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Entry
125207124 CDS
T09851
Name
(RefSeq) two-component response regulator ORR26-like
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
shis
Salvia hispanica (chia)
Pathway
shis04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
125207124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shis03000
]
125207124
Transcription factors [BR:
shis03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
125207124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
efb-c
Motif
Other DBs
NCBI-GeneID:
125207124
NCBI-ProteinID:
XP_047962301
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Position
2:31537840..31540860
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AA seq
563 aa
AA seq
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MDSCGFSSPRTECFPAGLRVLVVDDDPTWLKILEKMLKKCNYEVTTCNLAREALDLLRER
KDGFDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKP
IRMKELRNIWQHVFRKRIHEVRDIEGHESLDEMMLRSGADLLDDGFFFGGDPVPGKKRKD
VDHRSDDRVGGDPSSLKKARVVWTVELHQKFVKAVNLIGFEKVGPKKILDLMGVPWLTRE
NVASHLQKYRLYLSRLQKENELRTTLGGTMHSDLSPKDAAAGPGNASLQTLATKSSKQNI
SVHHDDPRNCEGIAKASPTPMAEAKAAEISDLAKSSTSSISFDRPFVQSSDAKSEPTIQV
QYSWSAGAPPLQFKPEQKPQARAPPVGFKQEQKPPLRFKKEQHQKPLFVAEHRFDHTPVA
MHHRTDNKTSDKPSPAATDPPYSKAKRGQPSKATKVESTAALFCIQPESPFTDCHTIDPI
PSSIWSTKTSQSFEQNLYDEPWHINALLGTGSALACDYTSPYPPNPYLGTIDPFCFNGQE
LITEVTSLKFPLDPVIDEGLYIA
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggattcgtgcgggttttcttcgccgcggaccgagtgttttccggccggtctccgggtg
ctggtggtggacgacgatcccacgtggctcaagattcttgaaaagatgcttaaaaagtgc
aattatgaagtaacaacatgtaatctggcgagggaggctctcgacttgctgcgcgagcgc
aaggatgggtttgatattgtgatcagcgatgttaacatgccagatatggatggttttaag
cttctagagcacgttggcctggagatggatctgcccgtcataatgatgtctgtggatggg
gagacgagcagggttatgaagggcgtccagcacggtgcttgtgactaccttctcaagccg
atcaggatgaaggagctgcgcaacatatggcagcacgtgttcaggaagaggatacacgag
gtgagggatattgaaggccacgagagccttgatgagatgatgctcagaagcggggcagac
ctcttggatgatggcttcttcttcggtggggatccagttcccggaaagaagaggaaggac
gttgatcacaggagtgatgaccgcgtgggaggcgatccctcctcattgaagaaggcaagg
gtggtttggactgtcgaacttcatcagaagtttgtcaaagctgtcaatctcattggtttt
gagaaagtcggtccaaagaaaatcctcgatctgatgggcgttccgtggctaactagagag
aatgttgctagtcacctacagaagtatcgactctacttgagcaggttacaaaaggagaac
gagctgagaaccacgcttggtgggacgatgcactcggatttatctccgaaagatgctgct
gctggcccaggaaacgcgtcccttcaaactctggccactaagagctctaaacagaacatt
tctgttcatcacgacgatcctagaaactgcgaaggaatcgccaaggcgagtcctacgcca
atggcagaggccaaggctgctgagatcagtgatcttgcaaaaagtagcacttcaagtatc
agctttgatcgcccttttgtacagagttctgatgcgaaatccgagcccacgatccaagtt
cagtactcgtggagcgctggagctccgcctctccagttcaaacccgagcagaagcctcaa
gccagagccccacccgttggattcaagcaagagcagaaaccacctctccggttcaagaaa
gagcagcatcagaaaccattgttcgttgcagagcaccggtttgatcacactcctgtggcc
atgcatcacaggacggataacaaaacctccgataaaccatcaccagctgcaacagaccct
ccatacagcaaggcaaaaaggggccaaccgagcaaggcaaccaaagttgagagcactgca
gccttgttctgcattcagcccgaaagcccttttacagactgccacaccattgatccaatc
ccgagctccatatggagcactaagaccagccagagcttcgaacagaatctatacgacgaa
ccttggcacataaacgcgcttcttggaactggatcagctctcgcgtgtgattacacctct
ccatacccaccaaatccctaccttggcactatagacccattctgtttcaacggtcaagag
ctcatcaccgaagtcacttccctaaagttcccgctcgaccctgtaatagacgagggtctg
tacattgcttga
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