KEGG   Salvia hispanica (chia): 125207275
Entry
125207275         CDS       T09851                                 
Name
(RefSeq) coatomer subunit beta'-1-like
  KO
K17302  coatomer subunit beta'
Organism
shis  Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:shis00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:shis04131]
    125207275
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:shis04147]
    125207275
Membrane trafficking [BR:shis04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    125207275
Exosome [BR:shis04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   125207275
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 WD40_CDC20-Fz Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_IFT140_1st ANAPC4_WD40 NBCH_WD40 Beta-prop_HPS5 WDR90_beta-prop_4th PEP5_VPS11_N WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_SPT8 WD40_like Beta-prop_WDR35_TULP_N Beta-prop_Nup120_160 WD_LRWD1 Beta-prop_DCAF12 HEAT_GCN1 TPR_1
Other DBs
NCBI-GeneID: 125207275
NCBI-ProteinID: XP_047962502
LinkDB
Position
2:complement(21045876..21054611)
AA seq 914 aa
MPLRLEIKRKLAQRSQRVKSVDLHPTEPWILTSLYSGTVCIWNYQTQIMVKSFEATDLPV
RSAKFIARKQWVVAGADDMFIRVYNYNTMDKVTVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWLCTQIFEGHSHYIMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHATTYRLENTLNYNLERVWAVGYIKGSRRVVIGYDEGTIMVKLG
REVPVASMDNGGKIIWAKHNEIQTVNIKAVGADNEVADGERLPLAVKELGNCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSTEGEYAVRESTSKIKIFSKNFQ
EKKSIRPTFSAEHIYGGNLLAMCSNDFICFYDWADCKLIRRIDVTVKNLYWADSGDLVTI
ASDTSFYILKYNRDVVSAHLDSGRSVDEQGVEDAFELLYEINERLRTGLWVGDCFIYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLANQSRVYLLDKEFNVIGYTLLLSLIEYKTLVM
RGDLERANEVLPSIPKEHLNSVARFLESRGMIEDALEVATDPDYRFELAIQLGKLEIAKE
IATVAQSESKWKQLGELALSTGMLEMAEECLKQAKDMSGLLLLYSSLGNAEGISTLASLA
KEHGKNNVSFLCLFMLGKLEDCLQLLIDSNRIPEAALMARSYLPSKVSEIVSLWRKDLSK
INQKAAESLADPEEYPNMFDDWQIAFAVEAKAAETRGKYPPASEYVQNVDRSTASLVETF
RSMQMEEEEEELPENGDVDYENGHEAQEPQHDEQVEGHDDGQEEPVVVDADSTDGAVLVN
GDEAEEEWVLTPRH
NT seq 2745 nt   +upstreamnt  +downstreamnt
atgccgctcagattggaaatcaagaggaaactcgcacaacgatcacaaagagtaaaatca
gtggatctgcatccaacagagccatggatattgacaagtttgtattcagggactgtttgt
atttggaattaccagactcagataatggttaaatcttttgaggctacagatttaccagtt
agatcggctaaatttatcgcacgaaagcagtgggttgttgctggtgctgatgatatgttc
attcgcgtgtacaattacaatacaatggataaggtaacagtgtttgaggcacatacagat
tatatcaggtgtgtggctgttcatcccactcttccctacgtgctgtcatcctctgatgat
atgctaataaagctttgggactgggagaagggatggttgtgcactcaaatttttgagggt
cattctcactatattatgcaagtgacttttaatccgaaagatacaaatacttttgccagt
gcttcacttgaccgcactattaagatctggaatcttggctctcctgatccaaactttacc
ttggatgctcacctgaaaggagtcaattgtgttgattatttcacgggtggtgataaacca
tatctcattactggttctgatgatcacactgctaaggtgtgggattaccagacaaagagc
tgtgtgcagacattagaaggccacacacacaatgtgtctgcagtttgcttccatcctgaa
cttcccattatcataactggttctgaggatggtactgtccgcatttggcatgcaaccact
tacagacttgaaaacacattgaattataaccttgaaagagtttgggcagttggctacatt
aaaggttcgagaagggtcgtaatcggttatgatgaaggcacgatcatggtaaagcttggt
cgtgaggtacctgttgctagtatggacaatggggggaaaataatttgggccaagcataat
gaaattcagacggtcaacatcaaggctgttggggcagataatgaggttgctgatggagag
agactacccttggcagttaaggaacttggaaattgtgatctttatccacagagcttaaag
cacaatcccaatggtaggtttgttgttgtatgtggagatggtgaatacataatatacaca
gctttggcatggagaaacagatcatttggctcggcattggaatttgtttggtcaactgaa
ggagaatatgctgttagagaaagcacatctaagattaagattttctccaaaaatttccag
gagaagaaaagcatccggcccactttttctgccgagcatatatatggtggcaatttattg
gcaatgtgttcaaatgattttatttgtttctatgattgggctgattgcaagttgatacgg
agaattgatgtcactgttaaaaatctctactgggctgacagcggtgatttggtgaccatt
gccagtgatacatcattctatatacttaaatacaaccgtgatgttgtttctgctcatcta
gatagtggaagatcagtagatgaacaaggtgtggaagatgcttttgagcttctttacgaa
attaatgaaaggttacgaactggactttgggttggggattgttttatttacaataactct
tcctggagactcaattactgcgtgggtggtgaggtgacaacaatgtttcatttagaccga
ccaatgtacctgcttgggtatcttgctaatcaaagtcgtgtttatctccttgacaaagaa
tttaatgttattggatacacattgctactcagcttgattgaatacaagactcttgtaatg
cgtggtgacttggaaagggcaaatgaggtcttaccatcaattccaaaggaacatctcaac
agtgtcgctcgtttcttggaatcacgaggtatgatagaagacgcacttgaagttgctaca
gatcctgattatagatttgagttggccatacagctaggcaaactagaaattgctaaggaa
attgcaacagtagcacagagcgagtctaagtggaagcaattgggtgaattagccttgtct
actgggatgttggagatggcagaggagtgcttgaagcaagcaaaggacatgagtggtttg
ttgctactctactcttccttaggcaatgctgagggaatttctacacttgcttctcttgcc
aaagaacatgggaaaaataatgtttcattcctttgtttatttatgttgggaaaattggag
gactgccttcagctgttgattgatagcaatcggatacctgaggctgcattgatggcacgg
tcatacctcccaagtaaagtgtcagagattgtttctctttggagaaaggacctcagcaag
attaatcagaaagctgccgagtctcttgctgatccggaagagtatcctaacatgtttgat
gattggcaaattgcttttgcagttgaagccaaagctgcagagacaaggggcaaatatcct
ccagcatctgaatatgtgcagaatgttgatagatcaaccgcaagtcttgtagaaactttt
agaagcatgcaaatggaagaagaagaagaagaattaccagaaaacggagatgtggattac
gagaatggacatgaagcacaagaaccacaacatgatgaacaagtagaagggcatgacgat
ggccaggaagagcctgttgtggtggatgctgactcaactgatggtgctgtacttgttaac
ggagatgaggccgaggaagagtgggtgcttacgcctcgtcactaa

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