Salvia hispanica (chia): 125207360
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Entry
125207360 CDS
T09851
Name
(RefSeq) ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic-like
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
shis03110
]
125207360
Chaperones and folding catalysts [BR:
shis03110
]
Heat shock proteins
HSP100
125207360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
UVR
Sigma54_activat
AAA_22
nSTAND3
TniB
NBD_SMAX1
AAA_14
AAA_18
AAA_28
NACHT
Zeta_toxin
IstB_IS21
AAA_25
Torsin
MazE_antitoxin
DNA_pol3_delta2
PorB
ARM_KDM8_N
Motif
Other DBs
NCBI-GeneID:
125207360
NCBI-ProteinID:
XP_047962618
LinkDB
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Position
2:complement(2934246..2939677)
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AA seq
924 aa
AA seq
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MAHALLQPIRLPSSPTWFGQFNAPNKSKNLPATMLCSSRSASITLSSFSGLRRANSVDAM
LHRGQSSFLSKVASAIAVNRRGRSSRMAPRAMFERFTEKAIKVIMLSQEEARRLGHNFVG
TEQILLGLIGEGTGLAAKTLKAIGIHLKDARIEVEKIIGRGSGFVAVELPFTPRAKRVLE
LSLEEARQLGHNYIAPEHLLLGLLREGDGVAARVLENLGADMSNIRTQVIRMIGENQETA
TVGGGDRSSGGNMPTLEEYGTNLTKLAEEGKLDPVSGRQEQIERVTQILGRRTKNNPCLI
GEPGVGKTAVAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEE
IRKSDDIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLEEYRKHIEKD
PALERRFQPVRVPEPTVDEAIVILKGLRERYEIHHKLHYTDEALVAAAQLSHQYISDRFL
PDKAIDLIDEAGSRVRLKHAKLPEEAKELEKEIRQITKEKNEAVRSQDFEKAGELRDREM
DLRAQMSGLVEKNKEMAKAESEAGDGGPIVTEVDIQHIVSAWTGIPVEKVSVDESDRLLK
MEETLHTRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALATY
YFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEK
AHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNIGSSVIEKGGRRIGFDLDYDEK
DNSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKQISDIMLKEVFKRLEGRD
IELNVTERFRDRVVDEGYDPSYGARPLRRAIMRLLEDSMAEKMLACEIKEGDSVIVDVDS
DGKVVVLNGSSGAPPEPYPEPVVF
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggcgcatgctttacttcaaccaatcagattgccttcttctcccacctggtttgggcaa
ttcaatgcgcctaataaaagtaaaaatttgccggcgactatgctgtgttcctcacgatcc
gcttccatcacactgagcagtttctcaggattgcggcgagctaattccgttgacgcgatg
ctgcaccgaggccagtccagtttcctatcaaaagttgcatctgcaatcgccgtcaataga
cgagggagaagttcgcgaatggctccgcgggccatgttcgagcgcttcacggagaaggca
atcaaggtgattatgctgtcgcaggaggaggcgaggcggctggggcataatttcgttggg
acggagcagatattattggggctcattggtgagggcactggacttgctgcaaagactctc
aaggccattggtatacacttgaaagatgcccgtatcgaggtggagaagatcattgggcgg
gggagtggatttgttgctgtggagttaccgtttactcctcgcgctaagcgtgtgctggag
ctctctcttgaggaagcccgccagcttggacacaattatatcgcaccagagcacttgctt
ctgggattgcttcgcgagggtgatggtgttgctgcgcgtgtcctggaaaatttaggagct
gacatgagtaacattcgaactcaggtcattagaatgataggtgagaatcaagagactgct
actgttggtggaggagatagaagctctggtggcaatatgcctactcttgaggagtacggt
accaatttaaccaagcttgcagaagagggtaaattagacccagtttctggaaggcaggaa
cagattgagcgtgtcactcaaatattgggaaggcgcacaaaaaataatccttgccttatt
ggagaacctggtgttggaaaaacagctgttgctgagggtcttgctcaaagaatagctaac
ggcgatgttcctgagactattgagggtaaaaaggtgataacattggatatgggtctcctt
gttgctgggacaaaatatcgtggtgaatttgaagaaagattaaagaagttaatggaagag
attaggaaaagtgacgacattatacttttcattgatgaagtacacactttgattggagca
ggagctgctgaaggggctattgatgctgcaaacatcttgaagcctgcattagctcgaggt
gaactacagtgcattggtgccactacacttgaagaataccgaaagcacattgagaaggat
cctgcattagaaaggaggtttcaacctgtcagggttcctgaacctactgtagatgaagcc
attgtgattcttaaagggcttcgggagcggtatgagatacaccacaagcttcactacaca
gatgaagctttagttgctgcagctcaattatcccatcagtatatcagcgaccgatttctg
cctgataaagctattgatttgattgatgaagctggctcccgggtccgactgaaacatgca
aagcttcctgaagaagctaaggagctagaaaaggagatcaggcagataacaaaggaaaag
aatgaagctgttcgaagtcaggattttgagaaggctggggagctacgtgatagagaaatg
gatcttagggcacaaatgtctggtcttgtcgaaaagaacaaggagatggccaaggcagaa
agtgaggctggggatggaggccctattgttactgaagttgacattcagcatatagtttca
gcttggacaggcatccctgttgagaaggtctcagttgatgaatctgatcgtctcctcaag
atggaggagacactccacacaagggtcattgggcaggacgaagctgtcaaagccattagt
cgtgctattcgccgtgcccgtgttgggctaaaaaatcccaaccgtcctatcgctagcttc
atcttttctggtcctactggtgtggggaaatctgaactagctaaagcactggctacctat
tattttggatctgaagaagccatgatccgacttgatatgagtgagttcatggagagacac
actgtttcaaagctaatcgggtcacctcctggatatgttggttacactgaaggggggcag
cttactgaggctgttcgccgtcgtccttacacagttgtgctttttgatgagattgaaaaa
gcccatcctgatgttttcaacatgatgcttcaaattctcgaagatggtaggctgaccgac
agtaaaggtagaacagtagacttcaaaaacactcttttgatcatgacatcaaatatcgga
agtagtgtaattgagaagggagggcgtcgtattggttttgatctggattatgatgagaag
gataacagttataaccggatcaagagccttgtgaccgaggagctaaaacaatatttcagg
ccagaatttttaaacagattggatgagatgattgtattcagacagctcaccaagctggaa
gtgaagcagatatctgatatcatgctgaaggaggtattcaagagactggaaggcagggat
attgaacttaatgtgaccgagaggtttagagatagggtggtcgatgaaggatatgacccg
agctacggagctagaccactcagacgagctattatgaggttacttgaggatagcatggct
gaaaagatgcttgcctgtgagatcaaagaaggcgactcagttatcgttgatgttgattct
gatggcaaagtcgtagtcctgaacggtagtagtggcgctcctccagaaccgtatcccgaa
ccagtggtgttctag
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