Salvia hispanica (chia): 125207385
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Entry
125207385 CDS
T09851
Name
(RefSeq) ubiquitin C-terminal hydrolase 12-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
125207385
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
shis01002
]
125207385
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shis04121
]
125207385
Enzymes [BR:
shis01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125207385
Peptidases and inhibitors [BR:
shis01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
125207385
Ubiquitin system [BR:
shis04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
125207385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
Motif
Other DBs
NCBI-GeneID:
125207385
NCBI-ProteinID:
XP_047962654
LinkDB
All DBs
Position
2:complement(5943664..5953971)
Genome browser
AA seq
1124 aa
AA seq
DB search
MTMMTPQPLDDDEDEEMLVPNSDSVEVPQPLVEGPLPMEEENAGILENLALGKPQASRFS
WTIENFSRVNVKKLYSDVFVVGNYKWRVLIFPRGNNVNALSMYLDAADCATLPYGWNRYA
QFSLAIVNQMDNKLTVKKDSQHQFNQREIDWGFTSFMPLSELYDTNKGYLMNDTCIVEAD
VAVREVNDIWIYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDNP
TGSIPLALQSLFYKLQYHDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLSEKLEDKMK
GTVVEGTIQKLFEGNHMNYIECINVDFKSTRKESFYDLQLDVKGCKDVYASFDKYVEVER
LEGDNKYHAEGHGMQDAKKGVLFINFPPVLQLQLKRFEYDFLRDTMVKINDRYEFPLELD
LDRDNGKYLSPDADRSIRNLYILHSVLVHSGGVQGGHYYAFIRPKLSDLWYKFDDERVTK
EDVERALEDQYGGEEEFPQTNPGYNNTPFKFTKCSNAYMLVYIRVSDKDKIICDVDEKDI
AEHLRIRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDLKEQIGKDAYFDLVDHDKVRNF
RIQRQMRFNIFKEEVAKEFGIPVQFQRFWMWAKRQNHTYRPNRPLTPQDEAQTVGSLREI
SSKVYGAELKLFLEVEFGLDLQSIPLPEITKDDILLFFKLYDPEKEELRYAGRLLVKGTA
KPIEILSKLNEMAGFSPDEEIELFEEIKFEPSVMCECLHKRASFLSSQIENGDIICFQKR
PSDKWKDKIRFPDVPSYLEYVKNRQVVHVRALERPREDAFCLELAKNHTYDDVVEKIAQQ
LGLEDPSKIRLTPHNCYSQQPKPNPIKYRSVDHLQEMLMHHNQISDILYYEVLDIPLPEL
QCIKNLKVTFHHATKDEAAVVNIRLPKQSTVGDVLNEIKKKVELSQPNAELRLLEVFCHK
IYKIFPILEKIENINDQHWTLRSEEIPEEEKNLGPNDHLIHVYHFTKEVSQNQVQVQNFG
DPFLLAIHEGETVADIKLRIQKKLQVPDEEFSKWKLALLSLGCPEYLEDSNVVSSRFQVQ
RREVYGVWKQYLGLEHSVTPPKRAYTIVNQTRHTIDHQAVRISN
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgatgactccgcagccattggatgatgatgaagatgaagaaatgctggtgcca
aactcagattcggttgaagttccccagcctttagttgaaggacctcttccaatggaagag
gaaaatgctgggatcttggagaatctggccttgggtaaaccacaagcttcacgtttctcg
tggacaatagagaacttttctcgagtgaatgtgaagaagctctattcagatgtcttcgtt
gttgggaattataaatggcgggtgcttatttttcctagggggaacaatgtgaacgccttg
tcaatgtatttggatgcggctgattgtgctaccttaccatatgggtggaacagatatgcg
cagtttagcttggctatagttaatcaaatggataacaagttgacagtgaaaaaagattcc
cagcaccagttcaaccaaagggagattgattggggtttcacgtctttcatgcctcttagt
gagctgtatgacaccaacaagggttacctaatgaatgatacttgtattgtcgaagctgat
gttgctgtacgtgaagtcaatgatatttggatatatgactcaaagaaagaaactggcttt
gttggacttaagaaccagggagcaacttgttatatgaattctctgctccaaactttgtac
cacattccttacttcagaaaggctgtatatcacatgccaacaactgagaatgataaccct
acaggaagcatacctttggcattacagagtttattttataagctccagtatcatgacacc
agcgtagctacaaaagaattgactaaatcatttggatgggacacgtatgattcctttatg
caacatgatgtgcaagaactgaacagagttttgtctgaaaagcttgaagacaagatgaag
ggaactgttgtggaaggaactatacaaaaattgtttgaaggaaaccatatgaattacata
gagtgcatcaacgtagatttcaagtctactagaaaagaatcattttatgaccttcagctt
gatgtaaaaggttgtaaggatgtttatgcttcatttgacaagtatgtagaagtcgaacgt
cttgagggagataacaaatatcatgcagaaggacatggtatgcaggatgcaaagaagggt
gtcttgttcatcaacttccctccagttctccagcttcaattaaaacgttttgaatatgat
tttctgagggatacaatggttaagataaatgaccgatatgaatttccattggagcttgat
ctagatagggacaatggaaagtatttgtcaccagatgcagatagaagcatacgaaacctc
tacatacttcacagtgttttagttcacagcggcggggtgcaaggtggacactattatgct
tttatcagaccaaaactttctgacctgtggtataagtttgatgatgagagggtcacgaaa
gaagacgtggagagggcactagaggatcagtatggtggtgaagaagagtttccacagaca
aatcctggctacaacaatactccattcaaatttacaaaatgctcgaatgcatacatgctt
gtgtatatacgagtgagcgacaaggataagattatatgtgatgtggatgagaaggatatt
gcagaacatcttcggataagactgaaaaaagaacaagaagaaaaggaagacaagagaaga
tacaaagcacaagcccacctttacactatcatcaaggttgctcgagatgaggatttaaaa
gaacagataggaaaggatgcctattttgatcttgtagatcatgataaagtccgtaacttc
cgtatccagaggcagatgcgttttaatatcttcaaggaagaagttgcaaaagagtttggt
attccagttcaatttcagcgcttctggatgtgggcaaaaaggcagaaccacacttaccgc
ccaaaccgaccattgacaccccaggatgaagctcaaactgttggatctttaagggaaata
tccagtaaagtgtacggtgcagagttgaaattatttctggaagtagagtttggactggat
ttacaatcaatccctctaccagaaataactaaggatgacatactcctcttctttaagctt
tatgatcccgaaaaagaagagctccgctacgctgggaggcttcttgtcaagggcacagca
aagcccattgaaatcctatcaaagttaaatgaaatggctggattttcccctgatgaagaa
attgaactttttgaggaaataaaatttgagccatctgtaatgtgcgaatgccttcataaa
agagcttcatttttgtccagtcagatcgaaaatggggatattatttgcttccagaaacga
ccttcagataaatggaaagacaaaatacgtttccctgatgttccttcatacttggagtat
gtgaaaaatcgccaggttgtgcatgttcgagccttggagaggcccagggaagatgcattt
tgcctagaactagcgaagaatcacacatatgatgatgtcgtggaaaaaattgcccagcaa
cttggcttggaggatccatccaaaattaggcttactcctcacaattgctattctcagcaa
ccaaagccaaatccgatcaaatatagatcagttgatcatctgcaagagatgcttatgcac
cacaaccagatctccgatatattgtattatgaagtgctggatattccgcttccagagttg
cagtgtataaagaatctgaaagtcaccttccatcatgctacaaaagatgaggctgctgtt
gtcaatattagattgccaaagcaaagcactgttggggatgttctcaatgagatcaagaaa
aaggtagaattgtctcaaccaaatgctgagcttaggttgcttgaagttttctgtcataaa
atttacaagattttccccatccttgagaaaattgagaacataaatgaccagcattggact
ttgcgctctgaggagattccggaagaagaaaagaatcttgggcccaacgatcacttgatt
catgtttaccattttacaaaggaggtttcccagaatcaagtgcaagtacagaattttggg
gacccatttttgttggctattcatgaaggtgaaacagtagcagatattaaactccgcatt
caaaagaaattgcaggtcccagatgaagagttttcaaagtggaagcttgcattgctgtcc
ttgggatgtccagagtatcttgaagactctaatgttgtctccagtcgtttccaggtccag
agaagagaagtttatggtgtttggaagcagtaccttgggctagagcactctgttactcca
cctaaaagggcatatactattgtgaaccagactcgccacacaattgatcatcaggcggtt
agaatatccaattga
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integrated database retrieval system
