Salvia hispanica (chia): 125207486
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Entry
125207486 CDS
T09851
Name
(RefSeq) F-box protein SKP2A-like
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
shis
Salvia hispanica (chia)
Pathway
shis04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125207486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shis04121
]
125207486
Ubiquitin system [BR:
shis04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
125207486
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Gene cluster
GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_At5g56370
LRR_4
F-box-like
F-box
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
125207486
NCBI-ProteinID:
XP_047962813
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Position
2:complement(25539014..25541533)
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AA seq
360 aa
AA seq
DB search
MRETEGLNSSFEKLMVFGAAESMSITEWKDVPVELLLRILSLVDDQTVIVASGVCHGWRD
AISWGLTRLSLSWCKRSMNDLVLSLAPKFTKLQALGLRQDTPQLHDDAVEAIAAHCHELQ
ELDLSKSFRLTDRSLYALAHGCPELVKLNISGCTGFSDSALGYLTGCCRKLKTLNLCGCV
RTATDRALKAIGYNCHQMQSLNLGWCDRVGDEGVKSLAYGCPNLRALDLCGCVLITDESV
VALANNCLHLRSLGLYFCQNITDRAMYSLAQSRVKNKHDVWASVKSRYEEEGLTNLNISQ
CTALTPPAVQALCDSFPDLHTCPGRHSLIISGCLNLTSVHCACASMHAHRAPHAMPHFAH
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgagagagaccgagggtttgaattcgagctttgagaaattgatggttttcggcgctgct
gagagcatgagcataacagagtggaaggatgttccggtggagctgctgctcaggattttg
tcactggtggatgatcagacggtgattgtggcttctggggtttgccatggatggagggat
gctatttcttggggcctcactcgcctttccctctcctggtgcaagaggagcatgaatgat
ctggtgctgtctctggcccctaagtttacgaagctgcaggctctcgggttgaggcaggac
acgccacagctccatgatgacgctgttgaggcgattgcagcccactgtcatgagcttcaa
gagttggatcttagcaagagcttcaggctcactgatcgctcgctgtacgcgttggcacat
ggttgtcccgagctcgtgaagctgaatatcagcggctgtacaggcttcagtgattctgct
cttggatatctgactgggtgttgcaggaaactgaagaccttgaatctttgtggctgtgtt
aggaccgcgacggatagggcgttgaaggcaattgggtacaactgccatcaaatgcagtcg
ttgaatcttggatggtgcgaccgtgttggtgatgaaggtgtcaagagtttggcgtatggt
tgccctaatcttagagctcttgatttgtgcggatgcgttcttattacagacgagagcgtc
gttgcattggcgaacaactgcctccacctgaggtcgctcgggctgtacttctgccagaac
attacagacagggcaatgtactctctagcacagagccgggtgaagaacaagcacgacgtt
tgggcatccgtgaagagcaggtacgaggaggaagggcttacgaacctcaacatcagccag
tgcacggccctcacaccccctgcggtacaggcactgtgcgattctttccctgatttgcac
acgtgccccggccggcattccctcataatcagcggctgcctcaacttgacgtccgtccac
tgcgcctgcgcctccatgcatgcccaccgggcaccacatgcgatgcctcatttcgcacac
tga
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