KEGG   Salvia hispanica (chia): 125207586
Entry
125207586         CDS       T09851                                 
Name
(RefSeq) cell division control protein 48 homolog C-like isoform X1
  KO
K14571  ribosome biogenesis ATPase
Organism
shis  Salvia hispanica (chia)
Pathway
shis03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:shis00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    125207586
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:shis03009]
    125207586
Ribosome biogenesis [BR:shis03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    125207586
SSDB
Motif
Pfam: AAA RuvB_N AAA_16 AAA_14 AAA_lid_3 AAA_5 AAA_22 RNA_helicase AAA_2 Rad17 TsaE ORC-CDC6-like TIP49 ATPase_2 NACHT AAA_28 NPHP3_N IstB_IS21 Mg_chelatase DUF815 AAA_18 nSTAND3 AAA_24 AAA_7 Sigma54_activat AAA_25 AAA_17 PIF1
Other DBs
NCBI-GeneID: 125207586
NCBI-ProteinID: XP_047962947
LinkDB
Position
1:49086147..49092208
AA seq 712 aa
MHRETPLSGIESSMDGESGSIAGTLRACHDQIQRCHVETATAASAGAKNPSDAQNVQLSV
DEPAAKRQKHDESQNANRQIEEARASASSSHSDSNVRELDSARNHKSGGDVREEDANGGI
MAIVGNLGRGNKLGDSKRGVKKNDSKWPMFSDMGGLHMDMLRDLNREVVAPMLQSEILRK
FGSTAILLQGPRGCGKTMLARAIGNEARVPFYETSAAALKAGVSGILELFSRAYKSAPSI
VFIDEIDALTSETDSLLQCPVKYLIACMDLERSNIGPGSYVLTIGATNKPNALDLALRQR
FDREFVLDVPRENERHDILSVLTRNHKVEVCFDIRKLARWTQGFVAGDLAELVNKARVGA
LNDAIGSRAHEMSFKDGYEAYGKPFSDEELEGLRLTLFNFYEANGMVCPSAEMEEFSKAS
CTNWDDVGGLQLLKLEFERRVVKRIKFPRVYESLVEIGMKDMPSSFFLYGPHGCGKTLIV
QALAKEAGANFMHIKGTELLKFGSWSRMMVENIFKYAKLHPPCIVFFDELDVFSPGDFAD
KDLEEDGDVWKSEDYREVRNQVFDIKNESDVYVFASSSKIEIVDRIPLIKEDFGRVLYAP
LPSPEERGEILKALALCKPIDAEVDLMALGKDDACHNFNGADLFTLVTVASAFAIERPSL
SRGGCMTITDADFNEVLAKISPSLSAEELKKWALHAEKIDVVDGVSVMDWLC
NT seq 2139 nt   +upstreamnt  +downstreamnt
atgcaccgggaaactcctctttccggcatagaatcgagcatggacggagaaagcggaagc
atcgccggcactctccgtgcgtgtcacgaccaaattcagcgctgccacgtcgagactgct
accgctgcctccgccggagcaaaaaaccccagcgacgcgcaaaacgtgcagttgtctgtg
gacgaaccagcggcaaaacggcaaaaacatgacgagagtcagaatgcgaatcggcaaatt
gaggaagctagggcttccgcttcatctagtcattcagattctaacgttagggaactcgat
tctgctaggaatcataaatctggcggtgatgtgagagaggaggatgcgaatgggggtatt
atggcaatagttgggaatctagggcgaggaaataaattaggggatagtaagagaggggtg
aagaagaatgacagtaagtggccaatgtttagtgatatgggtgggttgcatatggatatg
ttgcgggatttgaatagggaggtggttgcgccgatgctccaatcggagatactgcgtaag
tttggaagcaccgcaattctgttacaagggccacggggctgtgggaaaaccatgttggct
cgagccattggcaatgaggcccgagtgccgttctatgaaacatctgctgctgcgttaaag
gctggcgtttctggtatcctagagttgttctcccgagcatacaagagcgcaccatctatt
gtgttcattgatgaaattgatgcattgacttcagaaacggatagcttgttgcagtgcccg
gtaaaatatttgatcgcttgcatggatcttgaaagatcgaatattggacctggtagctat
gtgctgacgattggagcaaccaataagcctaatgctcttgaccttgccttaaggcagcgg
tttgatcgtgaatttgttttagatgttccaagagaaaatgaacggcatgacatactatca
gttctaacacgtaatcacaaggttgaagtttgttttgatatccggaagttagctaggtgg
actcagggttttgtagcaggagatttggcagaactagtaaataaggctcgcgtgggtgct
ttaaatgacgccattggctcgagagctcacgaaatgagttttaaggatgggtatgaagca
tatggaaaaccattttcagatgaagaattggaaggactcagattaaccttgttcaatttt
tatgaagctaatggtatggtttgcccttctgctgaaatggaagagttttccaaagcatca
tgtacaaattgggatgatgttggaggccttcaattgttgaaattagaatttgaacgcagg
gtagttaagcgtataaagtttccacgggtttatgagtctcttgtggaaattgggatgaag
gacatgccatcctcctttttcctttatggtcctcatggttgtgggaagacattgattgtc
caggctttggctaaagaagcaggagcaaatttcatgcatatcaagggcactgaactattg
aagtttgggtcatggagcaggatgatggtggaaaatattttcaaatatgcaaaacttcac
cctccatgcatagttttctttgatgagttggacgtattcagcccaggggatttcgcagac
aaagatcttgaggaggatggagatgtatggaagtcggaggactatagagaggtgcggaac
caagtctttgatataaaaaatgaatcagatgtttacgtgtttgcttcatcatctaagata
gagattgtggatcgtatcccgctcatcaaagaagattttggtagggttttatatgctcct
cttcctagtccagaagaaagaggagagatattgaaagctctcgctctatgcaaaccaatc
gatgcagaagtggatctgatggcgctggggaaagacgatgcttgtcacaatttcaatggc
gctgatctatttactttagtgacagtagcttctgcgtttgctattgaacgaccatcattg
tcccgtgggggttgcatgaccatcacagatgcagatttcaatgaagtgttagctaaaatc
tccccttctctctcggcggaggaactcaagaaatgggcgctacacgcggagaagattgat
gttgttgatggtgtatccgtgatggactggttatgttaa

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