Salvia hispanica (chia): 125207631
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Entry
125207631 CDS
T09851
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis00900
Terpenoid backbone biosynthesis
shis01100
Metabolic pathways
shis01110
Biosynthesis of secondary metabolites
Module
shis_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
125207631
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
shis01006
]
125207631
Enzymes [BR:
shis01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
125207631
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
125207631
2.5.1.29 geranylgeranyl diphosphate synthase
125207631
Prenyltransferases [BR:
shis01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
125207631
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
125207631
NCBI-ProteinID:
XP_047963014
LinkDB
All DBs
Position
1:19282016..19283185
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AA seq
314 aa
AA seq
DB search
MASSHSISLHNTIKTSINLSYAKSNSCLPPKLTPNFSHSTRPHCIKLSVVAQNQPYWHAI
ESEIDAFLDRSIPIRKPEAVFEPMRHLTFAAPRTVASALCVAACELVGGNRSHAMAAAAA
VHLVHAAAYAHEHLPLTDRTGPGPRPEVEHKYGPNIELLTGDGIVPFGFELLARSVGPAR
PERVLRVMIEISRAGGSEGIMDGLYKEGEIVDENSRFEFIEYVCKKKYGEIHGCAAASGA
ILGGGSDGEIQRLRNFGLYAGTVRGLMERKSSVEIENIVRKLRDLALKELEGFHGKRNVE
LLTSLVAEPSLCSA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggccagctctcactccatttccctccacaacacaatcaaaacctccatcaatctctcc
tatgccaagtccaactcttgccttcccccgaaactaacaccaaatttcagccattcgacg
cggccgcactgtataaagctgtcagtagtcgcccaaaatcaaccgtactggcacgcgata
gaatccgaaatcgacgcttttctcgatagatccatccccataaggaagcccgaggccgtc
ttcgagcccatgcgccacctcaccttcgcggccccgaggaccgtggcctcggccctgtgc
gtggccgcgtgcgagctcgtgggcggcaaccggagccacgccatggccgcggcggccgcg
gtccacctcgtgcacgcggcggcctacgcccacgagcacctccccctgaccgaccggacg
ggccccgggccgaggcccgaagtcgagcacaagtacggcccgaacatcgagctgctgacc
ggggacgggatcgtcccgttcgggttcgagctgctggcccggtccgtcggcccggcccgg
ccggagagggtcctccgggttatgatcgagatcagccgggccggcgggtcggaggggatc
atggacgggctgtataaggagggggagatcgttgatgagaattcaagatttgagttcatc
gagtatgtgtgtaagaagaagtacggcgagattcatggttgtgcggcggcgtctggagcc
atattgggcggcggaagcgacggcgaaatacagaggctgaggaatttcgggctttatgcg
ggaacggtgagaggattgatggagaggaaaagtagtgttgaaattgaaaatatagttagg
aaattgagggatttggctctcaaggagcttgaaggattccatggaaagaggaatgttgag
cttttaacgagccttgtagccgagccgagcctctgctcggcttag
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