Salvia hispanica (chia): 125207636
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Entry
125207636 CDS
T09851
Name
(RefSeq) oligouridylate-binding protein 1B-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125207636
03041 Spliceosome [BR:
shis03041
]
125207636
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
125207636
Spliceosome [BR:
shis03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
125207636
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_7
RRM_5
Motif
Other DBs
NCBI-GeneID:
125207636
NCBI-ProteinID:
XP_047963016
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All DBs
Position
2:38857181..38861093
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AA seq
421 aa
AA seq
DB search
MLNQRLKQQQHQALMQQALLQQQSLYHPGLLAAPQIEPIPSGNLPPGFDPSTCRSVYVGN
IHTQVTEPLLQEVFASTGPVEACKLIRKEKSSYGFIHYFDRRSASLAILTLNGRHLFGQP
IKVNWAYASGQREDTSSHYNIFVGDLSPEVTDAMLYSCFSVYPSCSDARVMWDQKTGRSR
GFGFVSFRSQQEAQSAINDLTGKWLGSRQIRCNWATKGAGTSEDKQSSDSKGVVELTASE
DVNEAASSDAPENNPQYTTVYVGNLAPEVTQVDLHRHFHALGAGSIEEVRVQRDKGFGFV
RYSTHAGAAMAISMGNGQSYLCGKPIKCSWGNKPTPAGTGSNPLPPPGPASMPGLSAADL
LAYERQLALAKMGGVHPLMHPQGQHPLKQASMGMGAGASQAIYDGGYQNVAAAQHHLMYY
Q
NT seq
1266 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatcagagattgaagcagcagcagcaccaggcgttgatgcagcaagctctcctc
cagcagcaatctctgtatcaccccggtctcttagctgctccgcagatcgaaccaattcca
agtggaaatctgcctcctgggtttgatccaagtacatgccgcagtgtgtatgtgggaaat
attcatacacaggtgactgaaccacttcttcaagaagtttttgctagtactggtcctgtc
gaggcttgcaagcttatcagaaaggaaaagtcatcctatggatttatacactactttgat
cgtaggtcagcttcacttgcaatattgactctaaatgggagacatctgtttgggcagcct
atcaaagttaactgggcatatgccagtggtcagagggaggacacatcaagccactacaac
atttttgttggtgatctaagcccagaggttactgatgcaatgctgtattcctgcttttct
gtttaccctagttgttcagatgcaagggttatgtgggatcaaaagactggccgttcaagg
ggatttggatttgtgtctttcagaagccaacaggaagcgcagagtgcaattaatgattta
actggtaaatggcttggtagcaggcagatacgttgcaattgggccacaaagggtgctggg
accagtgaggacaaacagagctcagattctaaaggtgttgtagaacttacagcctcagag
gatgttaatgaggccgcaagtagtgatgctcctgagaataaccctcaatatacaactgtg
tacgtcggcaaccttgccccagaggtaacccaggttgacctccatcgccacttccacgca
cttggtgcaggatcaatcgaggaagtaagggtccaacgtgataagggttttggctttgtt
cggtatagtactcatgctggcgcagcaatggctatttcaatgggaaatggtcagtcctac
ctctgcggtaaaccaatcaagtgttcgtggggaaacaagccaactccagctggaacgggc
tcaaaccctctccccccacccgggcctgcatccatgccgggcctctctgcagctgacctc
ctggcctatgagcggcaacttgcactcgccaaaatgggcggcgtgcatcctctaatgcat
ccgcaggggcagcatcctctgaagcaagcgtccatggggatgggcgccggtgcaagccag
gccatctacgacggtggctatcagaacgttgctgcagcccagcatcacctcatgtactac
cagtaa
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