Salvia hispanica (chia): 125207908
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Entry
125207908 CDS
T09851
Name
(RefSeq) retinoblastoma-related protein-like isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shis03000
]
125207908
Transcription factors [BR:
shis03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
125207908
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
Rb_C
Motif
Other DBs
NCBI-GeneID:
125207908
NCBI-ProteinID:
XP_047963372
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All DBs
Position
2:complement(15958031..15965578)
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AA seq
1009 aa
AA seq
DB search
MAEQIKISTPDREREGGGTSIEARFAHFCKNLLPLDDSDILDQATKLFGQSKSLLLANVS
AIGNGTPDEAERYWFAFVLYSVRRLRENVGSTEKGLNLCQILRAARLNIVDFYKELHQFL
IKVGSILSNLYGEDWEKRFEAKESHTNFVHLILLSKKYERAFRDLFSMVDANDGKQFNVA
NISGPGSEYYRFGWFLFLALRVHVFRMCKDLVSCTHGLVSVLAILLIHVPARYRNFNLND
SERIVMKGDKVDLIASLCNMYDTSEDVLRQTLEKANNMITDILKQSPCLASDSTPENLEN
IVTDGLIYYEDLMDESSLLPSMNLLEKDYDSAIRDMDGLDERIFINDNDSLLGSGSLSGS
AVSMIGNGTKRKIDTMSSPIKTISSPLSPYRSPVRHSNGFAGGGMSKMAATPVSTAMTTA
KWLRSVIAPLPSKPSVELERFLQSCDRDVSADVTRRAQIILEAIFPSSGPLQNATLMDNI
WAEQRRIEAMKLYFRVLQAMCMAESQILHATNLTSLLTNERFHRCMLACSAELVLATHKT
VTMLFPTVLERTGITAFDLSKVIESFIRHEETLPRELRRHLNSLEERLLESMVWEKGSSM
YNSLIVAKPALSAEVTRLGLLAEPMLSLDAIAMHINMSTGASAFAQKHEKTGQNGDILSP
KRVCTEYRSVLVERNPFTSPVKDRLLVLNNLKSKFQAPILHSAFASPTRPNPGGGGETCA
ETAVNVFFSKIVKLAAVRINGMVERLQLSQQIRESVYCLFQKILGQRTTLFFSRHIDQII
LCCFYGVAKISQLNLTFKEIIFNYRKQPQCKPQVFRSVYVDWKVPRRTGKTGPDHVDIIT
FYNEIFIPVVKPLLVELAPGGSEQGSSHASEAKNSIDGACPAPASPKPSPFPSLPDMSPK
KVSAAHNVYVSPLQSSKMDALISHSSKSYYACVGESTHAYQSPSKDLNAINDRLNGTRKL
RVALKFNEEEGALMRGTGLVMDSAVADSLGIQNGKRVLTPVKSEQQPEL
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atggctgagcagatcaagatttcaacccctgatcgtgagcgagaaggaggtgggacgtcc
attgaagcgcgatttgctcacttctgcaagaatttgctacccttagatgacagcgacatt
ttggatcaagccaccaagctgtttggccaaagcaagagtcttctgttagccaatgtatct
gctattggaaatgggacgccggatgaagcagaacgttattggtttgcatttgtcctatat
tcagttagaaggctcagagaaaatgttggctccacggagaagggtctcaatttatgccag
atattgagagcagcaaggctcaacattgttgatttttataaggaacttcatcaatttcta
atcaaggttggatcaattttgagtaacctgtatggtgaggattgggagaagaggtttgag
gcaaaggaatcacacacaaactttgtgcatttaatcctcttgagcaagaaatatgagcgt
gcatttcgggatcttttctctatggttgatgctaatgatggcaagcaatttaatgttgca
aatatttctggtcctgggtcagagtattaccgttttggatggtttctctttctggccctt
cgtgtacacgtgttccgtatgtgcaaagatttagtatcatgtactcatggcctggtttct
gttctggcaatacttttaatacacgttcctgctcgctacagaaacttcaaccttaatgat
tctgaacgcatagttatgaaaggcgacaaggttgatctcattgcatcactttgcaatatg
tatgacacttcagaagatgttctcagacaaactttggaaaaggctaacaacatgataact
gatatattgaagcaaagcccttgcttggcttctgattctacgcctgagaacttggaaaat
attgttacagatggtttgatctattatgaagatttgatggatgaatcttctttactacca
agtatgaacttgctggagaaggattatgattctgcaattcgagatatggatggattagat
gaaaggatttttataaatgacaatgatagcttgctaggttcagggagcttatctggaagt
gctgtaagcatgattggaaatggaacaaagaggaaaattgacacaatgtcctccccaata
aagacaatttcaagcccactgtccccttatcgatctcctgtacgccattccaatggtttt
gctggtggtggcatgtccaagatggctgctactccagttagcacagcaatgacaactgca
aaatggctacgttctgttatcgctccactcccatccaaaccttcggtagagctagagaga
ttccttcaatcatgcgacagagatgtgagtgctgatgtcactaggagggctcagataata
cttgaagccatatttccaagtagcggacctttgcaaaatgctaccttgatggacaacata
tgggctgaacaacgtcgaatcgaagcaatgaagctgtatttcagggttctccaagcaatg
tgcatggctgagtcccagattttgcacgcgaccaatttaacttctttgcttaccaatgag
agatttcacagatgtatgctagcatgttctgctgagcttgttcttgccacacataaaacc
gtgacaatgttgtttccaacagttttggagagaacaggaataacagcctttgatcttagt
aaggtgatagagagcttcatcagacatgaagaaactcttcccagggaactcaggagacat
ttaaattcgcttgaagaacgattattagagagcatggtttgggaaaaaggctcatcaatg
tacaactccttgattgtagcaaaacccgcgctttctgcagaagtaactcgtcttggcttg
ttagccgaacctatgctttctttggatgcaattgccatgcacattaacatgtcaactggt
gcctcagccttcgctcaaaagcatgaaaaaactggtcaaaatggagatatactttcacca
aaaagagtctgcactgagtaccggagtgtattggttgaacggaacccattcacgtcgcca
gtgaaagatcgcctcttggtcctaaacaacttgaaatctaagtttcaagctcctatttta
cattctgcatttgctagtcctacgagaccaaatccaggtggtggaggagaaacatgtgca
gaaacagctgtcaatgttttcttcagtaagattgtgaagttagcagccgtcagaattaat
gggatggttgaaagactacagctttcacagcagataagagagtctgtctactgccttttc
caaaagatccttggtcagcggaccacactgttcttcagccgacacattgatcaaattatc
ctttgctgcttctatggagtcgctaagatttcccaactgaacctgaccttcaaagaaatc
atttttaactatagaaagcaacctcaatgcaaacctcaggttttccggagtgtgtatgtt
gattggaaagttcctcgccgaactgggaaaaccggccctgatcatgttgatatcataaca
ttttacaatgagatattcattcctgtggtaaaacctcttctagttgagctcgctcctggt
ggatcagaacagggtagttctcatgcttcagaggccaagaatagcattgatggtgcttgt
ccagcaccagcatcgcctaaaccatccccatttccaagtcttccagacatgtcccctaag
aaagtgtccgcggctcacaatgtttacgtctccccgttgcagtcatcaaagatggatgca
ctaatatcacatagctcaaaaagctattatgcttgcgtgggagaaagcactcacgcgtac
cagagcccttcaaaagacctgaatgccattaacgatcgcttgaatggaaccaggaagttg
agagttgccctcaagttcaacgaggaggagggtgcgttgatgagagggacggggttggtg
atggactcagcagttgccgacagcctgggcatccaaaatggtaagcgtgtgttgacaccg
gtgaaatctgagcagcagccggagttgtaa
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