Salvia hispanica (chia): 125207945
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Entry
125207945 CDS
T09851
Name
(RefSeq) elongator complex protein 2
KO
K11374
elongator complex protein 2
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shis03016
]
125207945
Transfer RNA biogenesis [BR:
shis03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
125207945
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EML
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
NBCH_WD40
WD40_Gbeta
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_NUP159_NUP214
Beta-prop_NOL10_N
Motif
Other DBs
NCBI-GeneID:
125207945
NCBI-ProteinID:
XP_047963423
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Position
2:complement(30263912..30268433)
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AA seq
832 aa
AA seq
DB search
MRAEGGEMTVEVERAFIGAGCNRIVHNVSWGACDLISFGAQNAVAIFCPKTAQILTTLPG
HKASVNCTHWLPSSKFAFRAKNFERHYLLSGDADGEILLWEFSLADKKWRNVLQVSEKHK
KCVTCISAIVLSQTDALFASSSSDGVVSIWEIIFPSSAEGECKLSCLHSIVAGRKPMVAL
SFVELPGNSGHLALAMGGLDNKIHIYSGERSGKFVSACELKGHNDWIRCLDFSLPLYANG
EPSILLVSSSQDKGIRIWKMAVQNNHADGTKEETSLAAYIKGPIFVAGSFSYQISLESLL
IGHEDWVYSVEWQPPQSSSIEGTECYQPQSILSASMDKTMMIWQPEKTTGIWMNMVTVGE
LSHCALGFYGGHWSPTGNSILAHGYGGSFHHWKNVGTDFDDWKPQKVPSGHFAPVSDISW
SRDGEYLLSVSHDQTSRVFSAWSNESIIEDGEAWHEIARPQVHGHDINCVTMIKGKGNHR
FVSGADEKVARVFEAPLSFLKTLNHTTSQKSSYADDLPSNVQILGANMSALGLSQKPIYQ
YESKEINNNEGIDTLETIPEAVPTVLTEPPIEEQLAWHTLWPESHKLYGHGNELFSLCCD
HEGKLVASSCKAQLASVAEIWLWQVGSWKAVGRLHSHSLTVTQLEFSHDNNFLLSVSRDR
HFSIFAIKHTGQDELSHELVIRQEAHKRIIWACSWNPFGHEFATGSRDKTVKIWQLVNGS
SVKVLMTLPTFQSSITALSWLGVDSQKNHGLLAVGMENGVVELWTLSSTRNSDGDIAATT
ATLAVRFDPFLCHVSAVHRLRWQSAKKSDDSRSVQLASCGADHCVRLFQVHI
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgcgagctgaaggtggagaaatgacagtggaagtggagagagcgttcataggagcagga
tgcaacagaatagttcacaacgtttcgtggggcgcttgtgatttgatttcatttggtgcc
cagaacgccgttgccatattttgccccaagactgcgcaaattttgacgacgcttccgggc
cacaaagcgtctgtgaactgcacgcattggttgccgagcagcaagtttgcatttagagcg
aagaatttcgaaaggcattatctgttatctggagatgctgatggagaaatcttgctgtgg
gaattttcccttgctgataaaaaatggaggaatgtgctacaagtatcagaaaagcataaa
aaatgtgttacttgcatctctgcaattgtgctgtctcagacagatgctttatttgcatct
tcctcatctgatggagttgtgagcatatgggaaatcatatttccatcaagtgcggagggt
gaatgcaaattgtcttgcttgcattctattgttgctggtagaaaacctatggttgctctt
tcatttgtggagttgcctggaaacagtgggcacctagctctagccatgggtggtttggat
aacaaaattcacatctacagtggtgagagatcgggaaaatttgtcagtgcctgtgaactg
aaagggcataatgattggattcgttgtctggatttctcattacctttatatgcaaatggt
gaaccatcaattcttcttgtgagttcatctcaagacaaagggatacgtatatggaagatg
gctgtacaaaataaccatgctgacggcacgaaagaagaaaccagtttggccgcttatatt
aaaggtcctatatttgtagctggttcattctcttaccagatatctctggaatcccttctt
atcggacatgaggattgggtgtactcggtggaatggcagcctcctcaaagctcctctatt
gagggcactgaatgttatcaacctcagagcattttatctgcatccatggacaagactatg
atgatatggcagcctgagaagactactggtatatggatgaacatggtaactgtcggggag
ttgagtcattgtgctctagggttctatggtggtcactggagtccaactgggaactcaatt
ttagcgcatggctatggtggatcttttcatcattggaaaaatgttggcactgactttgat
gattggaaacctcagaaagttccttctggtcattttgcaccagtgtcagacatttcttgg
tctagggatggagaatatctgctatctgttagccatgatcaaacatctagggtattttct
gcatggtctaatgaatctataatagaagatggagaggcttggcatgaaattgcacgacct
caagttcatggccatgatattaattgtgtgacaatgatcaaaggtaaggggaaccacaga
tttgtaagtggggctgacgagaaagtggctagagtatttgaggctcccctctcctttttg
aagacactgaatcacaccacttctcaaaaatctagctatgctgacgatcttccatcaaat
gtgcaaattcttggtgcaaatatgtctgctttaggactatcgcagaagccaatatatcaa
tatgagtcaaaagaaataaataacaatgaagggattgatacccttgaaactattcccgaa
gcagttccgactgtgttgacagaaccacccattgaggagcaactggcatggcatacactg
tggccggagtcccacaagctctatggacatgggaatgaacttttttctctttgttgtgac
catgagggaaagctagtagcttcatcctgcaaggcacagttggcttctgttgcggagata
tggctatggcaagtaggctcttggaaggctgtaggtcgcttgcattcacacagtttaacc
gtgacacaattggagttctctcacgacaacaactttcttttatctgtttctagagatcgc
catttctccatatttgcaatcaagcatacagggcaagatgaattaagtcacgaactcgtc
atcaggcaggaggcccataagagaataatatgggcatgctcttggaacccgtttggccac
gaattcgccactggttcgagggataagacagtaaagatatggcaactggtaaacggttca
tcagttaaggtgctcatgactctgccgacgttccagagcagcattactgcattatcttgg
ctgggggtcgacagccagaagaaccacgggctcttagcagtgggaatggagaatggtgta
gtggaactgtggactctctccagcaccagaaatagcgatggcgacattgcagcaacaact
gctactcttgcggttcgttttgacccgtttctgtgtcacgtttctgcagttcatcgtctg
agatggcagagcgcgaagaagagcgatgattctaggagtgtgcagcttgcttcttgtgga
gctgatcattgtgtgagattgtttcaggtacacatttag
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integrated database retrieval system